Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01675 ATGGATATGGATGATGTTCAAAACAAGACATTGGTATGCCAAAATCCCTACACCTATGGTCACGAGAATGTCTGGCAATCAGGCAATCCATTAGAATCCCCCACATGTCTTTTATTTATGCAGGTCTCTTTGATGACCGTAGTAACACAATTAACGGAAATATGTTTTAAGCCATTAGGCCAATCCTCTCTGGTATCCCAAATTATTGGAGGAATGTTGTTTGGCCCTTCAGCTTTAGGGCACTTAAAGGTTGTACACAGGACCTTGTTCCCGGTAAAGGGTAGTGTTGTGCTTGAAACACTTTCATATTTTGGCCTCATGTTCTACTACTTCTTATGGAGTGTTAGATTAGATCTTTACACGGTGTTGAAGACAGAAAAGGTAGCTGTGGTTCTTGCTATATCTGTATCCATATTTACATTTCTTATCCCTACTGGAATCTCGTTCCTGTTGAAGACCTATGTTGCATTGGAAAAAGAAGTTGCAAACTCACTTCCATATATCGGTATCTCACAGACCTATACTATATTCATTAGCATAGCAGTGCTCTTGACGGATCTCAAAGTCCTTAATACTGACATAGGGCGATTAACCATATCAGTAGCAATTCTTACTGATGTGACTGGCATGGCTTTGTCAATGATTACTTATGCAGTAATTCAGTATACGGACGGTGATGTTCTCATACTAATATCTGCTACTCTATCCTCATTTGTATTCGTGTTTTTTATTGTATTTATGATGAGGCCAATGATACTTTGGATGGTAAAGAACCCAGGAAAAGGCTCGACTAATGAAATTTGCATTGTCTGTATCTTTGTCTTCGTTATCCTTTCTGGACTTGTCGGTGAACTAATCGGACAGCATTTTTCCATGGGACCAATAATTTTAGGTCTGTCTCTTCCAGAAGGGCCACCCATAGGAACAACTTTGATGAAAAAACTTGAGATAATGTGTATGTCTTTTCTTTATCCAATCAGCCTAGCTGTTAACGGATTGGGGGTTGATGTATTCAATATAAACATTGATTATCTATGGGTCATATGCCTCATTATAGTTGTGGGTTTCTTTGTAAAGATTGGTGCTATCATGTTGCCAGGATACTATTTGAATATATCCATGAAAAAATGTTGGATCATTGGTCTCCTTCTAAATGGAAGGGGTATATGTGAGCTTGTCTTCTTCAATCTGTGGTTGGAAAGTCAGATAATAAATGAAGACGAATTCTCTGTGATGGTTGTCTCTGTTATAGTAGTAAATGTTATCTTAGTAACAGTCGTAAAATTCATGTACGACCCTTCAAAACCATATGATAATGTAAGAAGATGCACAATTCAACATAGTAGAAGAGATTCTGAGCTCCGAATTATGGTGTGCATTGACGACAAGGAAACCGTCCCTACAATCCTGAACCTGTTAGAAGCCTCCTATGCTACAAGAGAAAGCACGATTGAGATTACAACGTTAGTCCTAGTTGAGCTTGAAGGAAGAGCAAGACCTGTTCTTGTTTCTAACCAATCACAAGAGAGTAACCATCCAGTCTTATACGACTCAAATCATATCGATAACGCATTGAGACAATACGCACAACAAAATGAAGAACATGTCTCCATTAAATCATACACTTCAATATCCTTATTTGAAACGATGCACGATGATATTTGTAGAATATCACTGGAACGCGAGGTCAACATTTTGATAATGCCGTTCCATAAGAGGTGGGAAATTGATGGGACAGTTGAGGTTGCACATAGGTCCATCAGAACAATGAACATTAAAGTCCTCCAAAAGGCACCATGTTCTGTGGGAATTCTAGTTGATAGGGGAATCTTGGGGGCATCTCCTTCACTCGTGGGGACAAGAGAACCATATTACGTTGTTGTGTTTTTCATTGGTGGTGCAGATGACGTGGAGACACTGGCTTATAGCGCTAGAATGGCTAGGCAGGAGTATGTGTGGGTAACTGTGGTTAGGTTCCTTCTATTTGGTGAGGAAAATTCTAAGGACAGAAAACGTGACAGTGATCTTATAGATGAATATAGATACAACAATGCTGGAAATAATAGGTTTGAGATTTTGGATGAAGTTGTGAAAGATGGGATAGATATGTCTATATGCATAAGAAGATTGGTCGATTATTTTGATCTTGTGATGGTGGGGAGACGACATTCACAGTATGCTATTCTTCAAGGACATGATAATTGGAGTGAGTGTGAAGAGTTAGGAGTTATTGGGGACATGCTAGCATCACCAAATTTTGTCACCAAGGCATCGGTGTTGGTCATACAACAACAAAGAATAAGAGGGAGATTTATCAAACCAACTGTCAATTTCAATCAGGTCTCAAAAGATCAATTTATGTCTACTCTTCCAACTAACGACTCATTAAGTCCTTCATGTACTATTTTGGTCGACAAGAATGACAAAATGTAA 2433 0.3876 MDMDDVQNKTLVCQNPYTYGHENVWQSGNPLESPTCLLFMQVSLMTVVTQLTEICFKPLGQSSLVSQIIGGMLFGPSALGHLKVVHRTLFPVKGSVVLETLSYFGLMFYYFLWSVRLDLYTVLKTEKVAVVLAISVSIFTFLIPTGISFLLKTYVALEKEVANSLPYIGISQTYTIFISIAVLLTDLKVLNTDIGRLTISVAILTDVTGMALSMITYAVIQYTDGDVLILISATLSSFVFVFFIVFMMRPMILWMVKNPGKGSTNEICIVCIFVFVILSGLVGELIGQHFSMGPIILGLSLPEGPPIGTTLMKKLEIMCMSFLYPISLAVNGLGVDVFNINIDYLWVICLIIVVGFFVKIGAIMLPGYYLNISMKKCWIIGLLLNGRGICELVFFNLWLESQIINEDEFSVMVVSVIVVNVILVTVVKFMYDPSKPYDNVRRCTIQHSRRDSELRIMVCIDDKETVPTILNLLEASYATRESTIEITTLVLVELEGRARPVLVSNQSQESNHPVLYDSNHIDNALRQYAQQNEEHVSIKSYTSISLFETMHDDICRISLEREVNILIMPFHKRWEIDGTVEVAHRSIRTMNIKVLQKAPCSVGILVDRGILGASPSLVGTREPYYVVVFFIGGADDVETLAYSARMARQEYVWVTVVRFLLFGEENSKDRKRDSDLIDEYRYNNAGNNRFEILDEVVKDGIDMSICIRRLVDYFDLVMVGRRHSQYAILQGHDNWSECEELGVIGDMLASPNFVTKASVLVIQQQRIRGRFIKPTVNFNQVSKDQFMSTLPTNDSLSPSCTILVDKNDKM 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01675 810 PANTHER CATION/H + ANTIPORTER 13 766 - -
Vimu6g01675 810 Pfam Sodium/hydrogen exchanger family 46 427 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vimu6g01675 810 Gene3D - 36 435 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01675 Vimu-Chr6 15383136 15385775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01675 8 764 Antiporter Super Family AT2G13620 33.588 9.72e-143 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01675 K26731 - gmx:100779700 1050.43