Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01667 ATGGCCGAAAAGAAAAAGGAAATTACGTACATAACATACATCAGCTTTAACATGAAAAGACAAGCTAGAACTGTTACAGCAGTGTCTGAAGCAGATGCCGAAAAGAAGTTATCCCCGGACTTCTACACTAGCAGCTGCCCAAAGCTGTTGCCTATAGTGAAAAAAGGAGTCATAAAAGGCATTAAAGATGAAACTCGCATAGGAGCTTCCTTACTCAGATTGCATTTCCATGACTGCTTTGTAAACGGTTGTGATGCGTCGATACTGTTGGATAATACAAGCAATTTCATAGGAGAGAAAACGGCAGCACCTAACAATAATTCAGCAAGAGGGTTCGACGTGATCGATGACATTAAAGCCAAGGTGGAGAAATCATGCCCCCGGGTTGTTTCCTGCGCTGATATTCTCGCTCTGGCTGCTCGAGACTCTGTTCTAGGGGGACCATCCTGGAAAGTAGGCTTGGGGAGAAGGGATTCAATCTCAGCTAGCAGAGCTGATGCCAATAACTCCATTCCTTCGCCCTTTCTCAATTTAACCGATCTCAAAACGAATTTCGCCAACCACGGGCTCTCTGTGAAGAACTTGGTGGCTCTTTCAGGTGCGCATACTCTTGGTCTTGCCAGATGTTTAACATTCCGAGCCCATATCTTCAATGATTCCAACGTTGATGCCTCCTTTGCCAAGTCCCTACAAAGCAAGTGCCCCATAAGTGGAAATGACGATTTACTTGAACCCCTTGACCTTCGAACTCCTACCCATTTCGATAATCTATACTTCAAAAACATACTGGCTAAAAGGGGCCTTCTTCATTCTGACCAGGAGCTGCTCAACGGCGGTTCCACCGGTAAACTGGTGAAAAAATACGCTACTGACACGGTTGCCTTCTTTAAAGCCTTCGCCAAGGGCATGGTCAAAATGAGCAATATCAAGCCTCTAACAGGAAGCGAGGGGCAGATCAGAATCAATTGCCGAAAAGTCTCTTAA 984 0.4533 MAEKKKEITYITYISFNMKRQARTVTAVSEADAEKKLSPDFYTSSCPKLLPIVKKGVIKGIKDETRIGASLLRLHFHDCFVNGCDASILLDNTSNFIGEKTAAPNNNSARGFDVIDDIKAKVEKSCPRVVSCADILALAARDSVLGGPSWKVGLGRRDSISASRADANNSIPSPFLNLTDLKTNFANHGLSVKNLVALSGAHTLGLARCLTFRAHIFNDSNVDASFAKSLQSKCPISGNDDLLEPLDLRTPTHFDNLYFKNILAKRGLLHSDQELLNGGSTGKLVKKYATDTVAFFKAFAKGMVKMSNIKPLTGSEGQIRINCRKVS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01667 327 Gene3D - 40 324 - -
Vimu6g01667 327 ProSitePatterns Peroxidases active site signature. 68 79 IPR019794 GO:0004601
Vimu6g01667 327 ProSiteProfiles Plant heme peroxidase family profile. 36 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu6g01667 327 CDD secretory_peroxidase 36 326 IPR033905 GO:0004601|GO:0042744
Vimu6g01667 327 PANTHER PEROXIDASE 72-RELATED 35 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g01667 327 FunFam Peroxidase 172 306 - -
Vimu6g01667 327 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g01667 327 PRINTS Plant peroxidase signature 70 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g01667 327 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g01667 327 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g01667 327 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g01667 327 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g01667 327 PRINTS Plant peroxidase signature 46 65 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g01667 327 PRINTS Plant peroxidase signature 110 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g01667 327 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu6g01667 327 PRINTS Haem peroxidase superfamily signature 68 82 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu6g01667 327 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu6g01667 327 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu6g01667 327 FunFam Peroxidase 40 183 - -
Vimu6g01667 327 Gene3D Peroxidase, domain 2 172 306 - -
Vimu6g01667 327 SUPERFAMILY Heme-dependent peroxidases 37 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu6g01667 327 Pfam Peroxidase 54 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01667 Vimu-Chr6 15330132 15331676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01667 34 326 Peroxidase AT5G05340 56.229 4.51e-121 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01667 K00430 - gmx:100793973 441.425