Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01644 ATGTTTGTCTGCAGAGGTTGTTTCCTTGTGTGGCGGTCGTTCTTTTCTGTTTATCTATTGAGTTTCGCTGATATAGGAGGAGGTATGCCTGGGTGCATGGGTCTTCATTGTAGTTATGGAAGTATGCGAAATGGGTTGTCACATACTTTCGTTACATTTGGGCCTCTGGTGTACTTTCCAATTTCTATTCCAAAGACAAAAAGTCCATTTTCTTTATTGTGTGCAAAGTGTTCTGCATACATTGCCAGTCCTTCATCAGAGAAAACCTGGACCATGTGTACCACCTTTCCGGAATATGTTGCTGCTCTGGCCACTATAGTTGGATCTATATTCGGTGGTGTTGGTATTGCTTGTCTTCCATTGGGACTTATACTTTCTTTCATTAGGCGTCCAAAGGCTGTTATCACTCATTCACAGTATATCAAGGAAGCTACTGAATTGGGCAAAAAAGCAAAAGATCTTAAGAAAGAAGCTGAGTCACTTCGTCAGGAGGAAAAAGCTGGTTCAAAGGGTAGGAAATTTCGTAAAAATGAGTTGCTTCAATTAGAAGATGTCAAGCTTATTGAAGAGATGTACCCACAAGGAGAAAAGGCTGAGGCAACGTGGGCACTAACAGTTCTAGGGTATCTGGCAAAACTTTTTTTGGAAATTTTAAGTGGCAATAGACACCCCTTCGATGGGGGCAGTGAATACAGGTTAATCGTTTGTGTGTCGTGGGTTGGTCATATCATTATCTGTCTATTAGTTGATCCTCCTCTTTGTCCTTTCTTGAATGAAGTTTTCATCAAGCTGGTTGATATCTGGGGTCTTCTTGGTACAGCTGCATTTGCATTCTTCTTCTTCTACCTTCTTCTTGCTGTGATTGCTGGAGCCATGAAGAGGATTGATGTTTTGTTAAGGGAAAAGGAAGACACAAGTAAAGAGAACCAACAACTATCTTGGAAATTAGATGAGATTAAACAAGGGAAAATGTCAACACCTGATACAACTGGTGAACAAGCGATGAAGGAAGAAAAGAACACAAGAATTCAGGCCATTGTCAATTTTGTCACAATGCAGTTTCAGCTATGCACTGTCTTTTTTACATTTTCCTTGGGTACAAGAACACGTTATTTTGGCCGGACCATTCTTCATGGTGGTGCAAGGTATCAAGCTACTGATCGTGGGTTTGTTGTCCGCGATATCAAGTTTTCAGAGAACTACAGACTCTACTCTCGTAGTCATTTTGTTAAAGGGTGA 1239 0.4084 MFVCRGCFLVWRSFFSVYLLSFADIGGGMPGCMGLHCSYGSMRNGLSHTFVTFGPLVYFPISIPKTKSPFSLLCAKCSAYIASPSSEKTWTMCTTFPEYVAALATIVGSIFGGVGIACLPLGLILSFIRRPKAVITHSQYIKEATELGKKAKDLKKEAESLRQEEKAGSKGRKFRKNELLQLEDVKLIEEMYPQGEKAEATWALTVLGYLAKLFLEILSGNRHPFDGGSEYRLIVCVSWVGHIIICLLVDPPLCPFLNEVFIKLVDIWGLLGTAAFAFFFFYLLLAVIAGAMKRIDVLLREKEDTSKENQQLSWKLDEIKQGKMSTPDTTGEQAMKEEKNTRIQAIVNFVTMQFQLCTVFFTFSLGTRTRYFGRTILHGGARYQATDRGFVVRDIKFSENYRLYSRSHFVKG 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01644 412 Coils Coil 288 308 - -
Vimu6g01644 412 PANTHER LIMR FAMILY PROTEIN DDB_G0283707-RELATED 78 293 - -
Vimu6g01644 412 Pfam 1,3-beta-glucan synthase component 342 412 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Vimu6g01644 412 Coils Coil 137 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01644 Vimu-Chr6 15163278 15167317 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01644 343 412 Cell Wall Biosynthesis AT3G07160 88.571 2.14e-34 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01644 K14617 - gmx:100800757 312.383