Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01635 ATGGCTTCTTCAGCGATGGAAACCTGCAAATCAGAGGATTTGCACATGCAGGTTGACGTTGAGAAGAACGCAGAGGATGTAAGGTCTCAGTGGGTTCTTAACGCTCCTGAGCCCCCAAGTCCATGGCGTGTGGTTGCAGATTCTGTGAGGAAAACTATCTCTCACTATAAACAAAAGTTTTCCTCTCTCTCAAATCAACCCTGCACCACACTCCTCATGTCACTTCTGCAGGCCGTTTTTCCTATTCTTGCTTGGGGCAGAAACTACACTGCCACTAAGTTCAGGAAAGATCTTCTTGCAGGCCTCACTATTGCCAGTCTCTGTATTCCCCAGAGCATTGGATATGCAACCTTGGCACATCTTGATCCTCAATATGGACTTTACACAAGTGTGGTACCGCCAATTGTGTATGCTGTGATGGGAACTTCTAGAGAGATAGCAATTGGTCCTGTTGCAGTGGTTTCATTGCTGTTATCCTCAATGATGGAGAAACTAGTAGACCCTGCTTCTGATCCAGTGGGTTATACAAAGCTAATTCTACTTGCTACTCTCTTGGCTGGCATCTTTCAGACTTCCTTCGGCCTCTTGAGGCTGGGGTTCCTTGTGGATTTCCTATCCCATGCTTCAATAGTTGGATTTGTGGCAGGAGCAGCCATCGTTATAGGCCTTCAACAGTTGAAGGGACTCTTAGGAATCAGCCATTTTACCACCAAAACCGACATAGTCTCTGTCATGAAAGCTGTCTGGGAAGCAGTTCATAATCCTTGGAATCCTCGAAATTTTATCCTTGGATGCTCGTTCTTGGTCTTCATCCTAACAACAAGATTTCTGAGTAAAAAGAAGAAGAAACTGTTCTGGTTGGCATCAATTTCTCCTCTGGTGTCAGTTATTTTGTCGACTCTACTTGTGTTTTTGACAAAAGCTGATAAAAATGGAGTAAAAATCGTGAAACATGTCAAAGGAGGACTAAACCCAATCTCCATCCATGAGTTAGACTTCAACAGCCCCCACATTGGAGAAGTCGCAAAAATTGCACTAGTGGTTGCTGTCGTTGCCCTTACAGAATCTATTGCTGTTGGGCGATCTTTTGCATCCATCAAAGGATACCAACTTGATGGAAACAAGGAGATGATGTCAATAGGTCTCACAAACATCATAGGATCCTTTACCTCTTGCTACGTTGCAACTGGTTCGTTCTCCCGCACTGCTGTTAATTATGCAGCTGGGTGTGAAACTCTGGTGTCAAACATTGTGATGGCGATGACGGTCTTGGTATCGTTGCAGTTTTTGACAAAGCTCTTGTATTACACTCCTATAGCTATTCTTTCTTCTGTGATCCTATCTGCTCTCCCAGGACTTATTGACGTCACTGAAGCTTACAAAATCTGGAAGGTTGATAAGATAGACTTTCTTGCTTGTGCTGGTGCCTTCTTCGGAGTTCTTTTTGCTTCTGTGGAGATTGGTCTGCTAGTGGCGGTGGTTATATCTTTTTCAAAGATCATTCTCATCTCAATTCGACCAGGCACAGAAACTCTAGGAAAACTTCCTGGCACTAACTTGTTCTGCGATGTCTATCAGTATCCGATGGCAGTTAAGATTCCAGGGGTTATGATAATACGAGTCAAGTCTGCGTTGCTTTGCTTTGCAAATGCCAATTTCGTTAGAGAAAGGATCATCAAATGGGTCTCTGAGGAAGAATCAGAAGATGACAAGGGAAATTCAAGAACCACCATTCAACTCGTAATTCTTGACACCTCCAATTTGGTGAACATTGACACCTCTGGAATTGCTTCTCTGGAGGAACTGCACAAGAGTTTGTCTTCACATGGAAAACAGTTAGCCATTGCGAACCCTAGGTGGCAAGTGATACACAAGCTAAAGGTTTCAAACTTTGTCTCCAAATTCGGTGGCAGAGTATTTCTCACTGTTGAAGAAGCTGTTGGCTGCAAGAGCCGCTGCTAA 1962 0.4388 MASSAMETCKSEDLHMQVDVEKNAEDVRSQWVLNAPEPPSPWRVVADSVRKTISHYKQKFSSLSNQPCTTLLMSLLQAVFPILAWGRNYTATKFRKDLLAGLTIASLCIPQSIGYATLAHLDPQYGLYTSVVPPIVYAVMGTSREIAIGPVAVVSLLLSSMMEKLVDPASDPVGYTKLILLATLLAGIFQTSFGLLRLGFLVDFLSHASIVGFVAGAAIVIGLQQLKGLLGISHFTTKTDIVSVMKAVWEAVHNPWNPRNFILGCSFLVFILTTRFLSKKKKKLFWLASISPLVSVILSTLLVFLTKADKNGVKIVKHVKGGLNPISIHELDFNSPHIGEVAKIALVVAVVALTESIAVGRSFASIKGYQLDGNKEMMSIGLTNIIGSFTSCYVATGSFSRTAVNYAAGCETLVSNIVMAMTVLVSLQFLTKLLYYTPIAILSSVILSALPGLIDVTEAYKIWKVDKIDFLACAGAFFGVLFASVEIGLLVAVVISFSKIILISIRPGTETLGKLPGTNLFCDVYQYPMAVKIPGVMIIRVKSALLCFANANFVRERIIKWVSEEESEDDKGNSRTTIQLVILDTSNLVNIDTSGIASLEELHKSLSSHGKQLAIANPRWQVIHKLKVSNFVSKFGGRVFLTVEEAVGCKSRC 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01635 653 Gene3D STAS domain 506 652 IPR036513 -
Vimu6g01635 653 FunFam Sulfate transporter 31 506 652 - -
Vimu6g01635 653 CDD STAS_SulP_like_sulfate_transporter 527 641 - -
Vimu6g01635 653 ProSiteProfiles STAS domain profile. 546 650 IPR002645 -
Vimu6g01635 653 SUPERFAMILY SpoIIaa-like 531 647 IPR036513 -
Vimu6g01635 653 ProSitePatterns SLC26A transporters signature. 123 144 IPR018045 GO:0008271|GO:0008272
Vimu6g01635 653 Pfam Sulfate permease family 94 474 IPR011547 GO:0016020
Vimu6g01635 653 NCBIfam sulfate permease 81 643 IPR001902 GO:0016020|GO:0055085
Vimu6g01635 653 Pfam STAS domain 527 646 IPR002645 -
Vimu6g01635 653 PANTHER SULFATE TRANSPORTER 61 648 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01635 Vimu-Chr6 15092101 15096919 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01635 28 647 Inorganic Solute Cotransporters AT5G10180 68.599 0.0 894
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01635 K17469 - gmx:100817831 1177.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01635 6 15092101 15096919 Vimu6g01635 6 15092101 15096919 ECH