Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01634 ATGTGCAGGAGCTCTAGTAACTCAGAGATGGTAGCTTCGAAGAAAAGCACGTTAGAAGAGGTTTTGGACATTGAGACCAGCATGTCTCGGTCTCAGTGGGTGTTAAATCCTCCAGATCCACCCTCATTGCCGCGTCAGGTCCTCGACAACGTCAAGGACATCCTTTTACCGCATCCTCAACCAAACACATTTTCTTCTATGAGGAACCAGCCCTTTTCCAAACGCGCTTTTGCTTTCTTCCAGAACTTGTTTCCCATTCTTGCTTCATTCCAAAACTACAATGCTCAAAAGTTAAAGTGCGATTTCATGGCCGGCCTAACCCTTGCAATCTTCGCCGTTCCTCAGTGTATGGGAAATGCAACATTGGCGCAGCTAAGTCCAGAATATGGCCTCTATACAGGAATTGTACCACCTCTTATTTATGCTTTGCTAGCGAGTTCAAGGGAAACAGTGATTGGACCTGGATCTGTAGATTCACTGCTACTTTCCTCAATGATTCAGACATTGAAAGTTCCAATTGAATACAATCAACTTGTTTTCACTGTGACATTTTTTGCTGGCATCTTTCAAGTTGCTTTCGGCCTCTTTAGGTTAGGTTTTCTGGTGGAATATATTTCCCAATCGACGATCGTAGGGTTCTTGGCAGCAGCTGCTGTGGGCATTGGACTACAACAATTGAAAGGATTATTTGGGATCGTTAACTTTACCAACAAAACTGCTTTATTTTCCGTGCTCAAATCTCTTTGGACATCCTTCAGAAACCAATCAGCGTGGCATCCCTACAACTTCGTCATTGGATTCTCATTCCTATGCTTCATCCTATTTACCAGATTCCTGGGTAAAAGGTACAAGAAACTCATCTGGTTGTCACACGTTGCTCCTCTCCTTTCAATTATCGTATCCTCTATCATTGCGTACAAAATAAATGTCGATGAGGCTCATGTGAAGGACTACAGAGTTGAAGTGTTGGGACCAATTAAAGGAGGGGGTAGCTTGAATCCAAGCTCATTCAATCAGTTAATATTTGATACCAAAGTTGTCGGTCATTTGATCAGAATAGGCTTGACCATTGCCATTATTTCAATCACGGGATCGATTGCTGTTGGACGATCATTTGCATCTCTAAAAGGACACAGCATTGATCCGAACAGAGAAGTGGTATCATTGGGCATAATGAACATTGTTGGATCCTTAACTTCTTGCTATATTGCATCAGGGTCTTTGTCACGTACTGCTGTAAACTACAATGCTGGATCAGAAACAATGGTGTCGAACATAGTGATGGCACTGACGGTGCTGTTGTCGCTTAAATTTCTGACAGGGCTTTTGTATTTCACTCCGAAAGCAATCTTAGCAGCAATAATTCTGTCGGCTGTACCAGGACTGATTGACCTAAACAAAGCGTCTGAAATTTGGAAGGTTGATAAAATGGATTTCCTTGCTTGTGCTGGAGCCTTCTTCGGAGTCCTGTTTGCATCTGCAGAAATAGGCCTTGCAGTTGGGATAACGGTTTCATTCGCGAAGATAATTGTAACCTCAATTCAACCTGCTATAGCGGTTATCGGAAGGCTTCCAGGAACCGATTCATTCGGCGATGTTCAACAGTATCCGATGGCACTCAACACTCCCGGAGTTTTCATCGTCTCTCTAAAATCTGCATGGCTTTGTTTTGCAAATGCAAATCTTGTCGAGGAAAGGATTGAGAGATGGATGACCGATGAAAAAGCTTATAATCATGGCAGACCAGGACAAAACACCTTCCATCACCTCATCATAGATGCCTCAAGTCTTACCAACATTGACACCACTGGAATTGCTTGTCTGGTAGAGCTCAATAAAAATATGGCTTCACGCGGAATAAAGTTAGCTATCGCTAACCCTAGGTGGCATGTAATTCACAAGCTAAGATTAGCTAACTTCGTCAGCAAAATTGGAGGAAGGGTTTTCCTTTCGGTGGTGGAAGCAGTGGATGCTTGTGTTGCCACTAAAATGGTTGCTGTATGA 2004 0.4306 MCRSSSNSEMVASKKSTLEEVLDIETSMSRSQWVLNPPDPPSLPRQVLDNVKDILLPHPQPNTFSSMRNQPFSKRAFAFFQNLFPILASFQNYNAQKLKCDFMAGLTLAIFAVPQCMGNATLAQLSPEYGLYTGIVPPLIYALLASSRETVIGPGSVDSLLLSSMIQTLKVPIEYNQLVFTVTFFAGIFQVAFGLFRLGFLVEYISQSTIVGFLAAAAVGIGLQQLKGLFGIVNFTNKTALFSVLKSLWTSFRNQSAWHPYNFVIGFSFLCFILFTRFLGKRYKKLIWLSHVAPLLSIIVSSIIAYKINVDEAHVKDYRVEVLGPIKGGGSLNPSSFNQLIFDTKVVGHLIRIGLTIAIISITGSIAVGRSFASLKGHSIDPNREVVSLGIMNIVGSLTSCYIASGSLSRTAVNYNAGSETMVSNIVMALTVLLSLKFLTGLLYFTPKAILAAIILSAVPGLIDLNKASEIWKVDKMDFLACAGAFFGVLFASAEIGLAVGITVSFAKIIVTSIQPAIAVIGRLPGTDSFGDVQQYPMALNTPGVFIVSLKSAWLCFANANLVEERIERWMTDEKAYNHGRPGQNTFHHLIIDASSLTNIDTTGIACLVELNKNMASRGIKLAIANPRWHVIHKLRLANFVSKIGGRVFLSVVEAVDACVATKMVAV 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01634 667 Pfam STAS domain 536 655 IPR002645 -
Vimu6g01634 667 CDD STAS_SulP_like_sulfate_transporter 536 653 - -
Vimu6g01634 667 FunFam Sulfate transporter 31 515 662 - -
Vimu6g01634 667 ProSitePatterns SLC26A transporters signature. 127 148 IPR018045 GO:0008271|GO:0008272
Vimu6g01634 667 NCBIfam sulfate permease 85 651 IPR001902 GO:0016020|GO:0055085
Vimu6g01634 667 SUPERFAMILY SpoIIaa-like 542 659 IPR036513 -
Vimu6g01634 667 PANTHER SULFATE TRANSPORTER 65 659 IPR001902 GO:0016020|GO:0055085
Vimu6g01634 667 ProSiteProfiles STAS domain profile. 555 659 IPR002645 -
Vimu6g01634 667 Gene3D STAS domain 515 663 IPR036513 -
Vimu6g01634 667 Pfam Sulfate permease family 98 483 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01634 Vimu-Chr6 15080016 15086629 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01634 29 664 Inorganic Solute Cotransporters AT5G10180 53.354 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01634 K17469 - gmx:100817841 1079.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01634 6 15080016 15086629 Vimu6g01634 6 15080016 15086629 ECH