Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01565 ATGGCAGCTCTGTTACCTTGCGCGCCCAACGTAGTCTCTGCTCCGTTCGGGAACCGGAGCACGAGCCGCCTCCCCAACCGTCCTCAATCTCACGCTTTCTCCGGTTCGACCAGACACTATCTTCGCGGCTCCCTCTCCGTCGCCCGGTTCGGATTCAAACCCGAGTTCTTGCCCGAGCCGGAGGACGCTGAAGGCTTGCTCAGAGAACTGTTTGGCCGAGCGGAGGGACTTTTTTACACGATTGCAGACGCCGCCGTTTCTTCTTCCGACACGGTTGCTGCTTCCGCCACCGCCAAACAGAGCAACGATTGGCTTTCCGGAATCACTAATTACATGGAGACGGTTCTCAAGGTACTCAAGGATGGGCTTTCTGCTTTGCATGTCCCATATGCTTATGGTTTTGCAATTATACTGCTCACAGTTCTTGTAAAAGCTGCCACTTTTCCTCTAACCAAAAAGCAGGTAGAATCCGCCTTAGCTATGCGAACTTTGCAACCTCAAATAAAGGCTATCCAGGAGCGGTATGCCGGTGATCAGGAGAGACTTCAACTTGAAACTGCTAGATTGTATAAACTAGCCAACATTAATCCTCTAGCAGGATGCCTGCCCACACTCGCAACCATACCAGTGTGGATTGGGCTATATCGAGCCCTTTCAAATGTGGCAGACGAGGGACTCCTTACTGAAGGCTTCTTTTGGATACCTTCTCTTGCTGGTCCAACTACAATTGCAGCTCGTCAAAATGGCAGTGGTATCTCTTGGCTTTTTCCTTTTGTGGATGGTGCCCCTCCCCTTGGATGGTCAGATACATTGGCTTATCTGGTCTTGCCGGTGTTGCTGATCGTCTCTCAGTACATATCTGTCCAAATAATGCAGTCATCACAGCCTAATGATCCCAACATGAAAAGTTCTCAAGTCTTGACCAAGTTCCTTCCATTAATGATTGGTTACTTTGCTCTCTCAGTTCCTTCTGGTCTTAGCCTTTACTGGTTAACAAATAATATATTGAGCACTGCACAACAAGTATGGCTTCAAAAGTTAGGAGGTGCCAAAAATCCTGTGAGGCAAGTCCCAGATGTTATCATCAAAAATGAAGGAACCCAGGTTCCGAAGTCAATATCTAAGCTAAATTCCACAATAGTGGAAGAAGCCGGCCAAATTGAGAAAACATCAGAGGGGCCACAACCTGGTGATAGATTTAAGCAATTAAAGGAGCAAGAGGCAAGGAGAAGACAACAAAGAGAAGAAGAAAAAAGGAAAGGCATGGAAGCAGCAGCTAGAGAGACTAAAGTAGATGATAGTCACGTGACACTTGAGAAAACTGGAGGTGATTTAACTGTTGAAAAATCTCGGTCTGTGGGTTCAGATACTGATCCCTCCATATCTGGAGTGGTAAATGGTAACTTTTTAAGTACAGACTTAGAGGCAAATCAGAATTTTACATCTACATCTGAGACAGAAAATAATGAAGGCTCTGCTCATTTCAACAATGATGAGATAAACGAGAAAAATTCAGACAAGGAACCAAGAGAAGTATTAACATCTACAACCACTGCAAACAGACAACATCCTGCAGAAGATGCAGATCGCATGACAAAGGATTGA 1605 0.4586 MAALLPCAPNVVSAPFGNRSTSRLPNRPQSHAFSGSTRHYLRGSLSVARFGFKPEFLPEPEDAEGLLRELFGRAEGLFYTIADAAVSSSDTVAASATAKQSNDWLSGITNYMETVLKVLKDGLSALHVPYAYGFAIILLTVLVKAATFPLTKKQVESALAMRTLQPQIKAIQERYAGDQERLQLETARLYKLANINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGAPPLGWSDTLAYLVLPVLLIVSQYISVQIMQSSQPNDPNMKSSQVLTKFLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVRQVPDVIIKNEGTQVPKSISKLNSTIVEEAGQIEKTSEGPQPGDRFKQLKEQEARRRQQREEEKRKGMEAAARETKVDDSHVTLEKTGGDLTVEKSRSVGSDTDPSISGVVNGNFLSTDLEANQNFTSTSETENNEGSAHFNNDEINEKNSDKEPREVLTSTTTANRQHPAEDADRMTKD 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01565 534 MobiDBLite consensus disorder prediction 478 534 - -
Vimu6g01565 534 MobiDBLite consensus disorder prediction 496 510 - -
Vimu6g01565 534 CDD 5TM_YidC_Alb3 133 346 IPR047196 -
Vimu6g01565 534 MobiDBLite consensus disorder prediction 448 466 - -
Vimu6g01565 534 MobiDBLite consensus disorder prediction 478 495 - -
Vimu6g01565 534 Pfam 60Kd inner membrane protein 132 346 IPR028055 -
Vimu6g01565 534 Coils Coil 400 425 - -
Vimu6g01565 534 MobiDBLite consensus disorder prediction 16 35 - -
Vimu6g01565 534 MobiDBLite consensus disorder prediction 386 466 - -
Vimu6g01565 534 NCBIfam membrane protein insertase YidC 132 346 IPR028055 -
Vimu6g01565 534 PANTHER OXA1 82 411 IPR001708 GO:0016020|GO:0032977
Vimu6g01565 534 MobiDBLite consensus disorder prediction 394 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01565 Vimu-Chr6 14584081 14590672 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01565 70 418 Chloroplast and Mitochondria Gene Families AT2G28800 56.534 1.85e-131 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01565 K03217 - gmx:100802546 875.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01565 6 14584081 14590672 Vimu6g01565 6 14584081 14590672 ECH