Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01486 ATGATGTTGAAATCCTTATGGAAAAGCCTGATAAGCTTTCAACATAAGTGTGTGAAGAAGCAAAAGAGTGGAGTTGATGGAAGTGTGTCAGTGCATGGTGAAGAAGACTTGGTCGTTTTGCCTGTGCAGTGTTGCAACTGTTGCATAGAAGAAACCAAACAATGCAATTGTGACCATACTCATGCACCAGAAGACACAAATGTCCACGCTCAGCGTGATGCTAACTCGAACAGTTCCTTTACTCATGCTGTCATCAACATGGTGGGGATGCTCGTAGGTTTGGGGCAACTATCAACTCCATATGCAGTGGTAAGTGGAGGGTGGGTGTCTGCATTCTTGCTTGTAGGATTAGGTGTGATGTGTTCTTACAGTTCTCACATACTTGGAACATGCCTCAGAAAGAATCCAAAGTTAAGAAGCTTTGTGGATATTGGGAAACATGCCTTTGGATCAAAAGGAAGGTTGGTGGCTGCAACAATCATCTACATGGAAATCTTCATGTCCCTTGTTTCCTACACCATCTCATTACATGATAATTTGAACACAGTCTTTCTGGGGACAAATCTCAAGCACCACTTCCCCAAATTCTCTTCATCTCAGTTCCTAACAGTGGTGGCAGTTCTCATTGCCCTCCCTAGTTTGTGGATCAGAGACCTCTCTTCCATATCTTTCCTTTCAACACTTGGCATTCTCATGTCTCTCCTCATTTTTCTCTGTGTAGCTGCCACTGCACTTTTAGGACATGTCCGAAACAATCATGCCATACCTGTCCTCCAACTCCATAATATTCCATCAGTATCTGGCCTTTACGTCTTTGGCTATGGAGGACACATTGTTTTCCCCGAATTATACACATCCATGAAAGACCCTTCAAAATTTACCAAGGTTTCTATTATGAGCTTCGCAGTGGTTACGGCAATTTACACGACACTGGGGTTCATGGGAGCGAGGATGTTTGGTAAGGATGTAAAGTCTCAAATAACTCTGAGCATGCCAGCAGAGAGCATTGTGACAAAGGTTGCTCTGTGGGCAACCGTGGTGGCACCGATGACCAAATACGCACTTGAATTCACACCATTGGCAATTCAACTAGAACATGCTCTTCCAAGCACCATGAGTGGCAGAAGCAAGATGATTATTAGGGGTTCCGTGGGTTCATTTTCACTTTTGGTCATACTAGCCCTTGCTCTGTCGGTTCCATATTTTGAACATGTACTGAGTCTGACTGGTTCCCTTGTCAGTGTTGCCGTTTGTTTGATTCTGCCATGTTCTTTCTACTTGAAGACATGTTGGGGTCAAATATCAAACCTTGTCTTGCTCCTTAACCTCTTTCTCATCACATTTGGCTTTCTTCTTGCTGTCATGGGCACCATTTCCTCCTCGAAGTTGCTACTCAAAAGTTTTCAGTTGCATCACTCAAGTTAA 1425 0.4365 MMLKSLWKSLISFQHKCVKKQKSGVDGSVSVHGEEDLVVLPVQCCNCCIEETKQCNCDHTHAPEDTNVHAQRDANSNSSFTHAVINMVGMLVGLGQLSTPYAVVSGGWVSAFLLVGLGVMCSYSSHILGTCLRKNPKLRSFVDIGKHAFGSKGRLVAATIIYMEIFMSLVSYTISLHDNLNTVFLGTNLKHHFPKFSSSQFLTVVAVLIALPSLWIRDLSSISFLSTLGILMSLLIFLCVAATALLGHVRNNHAIPVLQLHNIPSVSGLYVFGYGGHIVFPELYTSMKDPSKFTKVSIMSFAVVTAIYTTLGFMGARMFGKDVKSQITLSMPAESIVTKVALWATVVAPMTKYALEFTPLAIQLEHALPSTMSGRSKMIIRGSVGSFSLLVILALALSVPYFEHVLSLTGSLVSVAVCLILPCSFYLKTCWGQISNLVLLLNLFLITFGFLLAVMGTISSSKLLLKSFQLHHSS 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01486 474 PANTHER AMINO ACID TRANSPORTER 69 458 - -
Vimu6g01486 474 Pfam Transmembrane amino acid transporter protein 77 458 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01486 Vimu-Chr6 14148256 14150310 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01486 45 472 Amino Acid or Auxin Permease AAAP Family AT5G16740 60.373 1.37e-174 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01486 - - gmx:100790897 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01486 6 14148256 14150310 Vimu6g01486 6 14148256 14150310 ECH