Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01484 ATGTGTTCTTACAGTTCTCACATACTTGGAACATGCCTCAGAAAGAATCCAAAGTTAAGAAGCTTTGTGGATATTGGGAAACATGCCTTTGGATCAAAAGGAAGGTTGGTGGCTGCAACAATCGTCTTCATGGAAATCTTCATGTCCCTTGTTTCCTACACCATCTCATTACATGATAATTTGATCACAGTCTTTCTGGGGACAAATCTCAAGCTCCACTTCCTCAAATTCTCTTCATCTCAGTTCCTAACAGTGGTGGCAGTTCTCATTGCCCTCCCTAGTTTGTGGATAAGAGATCTCTCTTCCATATCTTTCCTTTCAACACTTGGCATTCTCATGTCTCTCCTCATTTTTCTCTGTGTAGCTGCCACTGCACTTTTAGGACATGTCCGAAACAATCATGCCATACCTGTCCTCCAACTCCATAATATTCCATCAGTATCTGGCCTTTACGTCTTTGGCTATGGAGGACACGTTGTGTCATGTTGA 489 0.4233 MCSYSSHILGTCLRKNPKLRSFVDIGKHAFGSKGRLVAATIVFMEIFMSLVSYTISLHDNLITVFLGTNLKLHFLKFSSSQFLTVVAVLIALPSLWIRDLSSISFLSTLGILMSLLIFLCVAATALLGHVRNNHAIPVLQLHNIPSVSGLYVFGYGGHVVSC 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01484 162 PANTHER AMINO ACID TRANSPORTER 1 159 - -
Vimu6g01484 162 Pfam Transmembrane amino acid transporter protein 2 160 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01484 Vimu-Chr6 14119676 14120164 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01484 1 160 Amino Acid or Auxin Permease AAAP Family AT5G16740 57.143 6.41e-55 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01484 - - gmx:100786839 281.567