Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu6g01460 | ATGAAATTGCGTACTACCGGAAGAGTGACTACCAAAGTAGATGTGTACGCATTTGGAGTAGTTTTGATGGAACTGATCACAGGTAGAAGGGCATTGGACGATACTGTGCCTGATGAAAGGTCTCACCTGGTTTCCTGGTTCCGTAGGGTGCTGATTAACAAAGAGAACATCCCCAAGGCTATTGATCAAACTCTCGATCCTGATGAGGAAACCATGGAAAGCATATATAAAGTGGCTGAACTGGCAGGTCATTGCACTGCTCGTGAACCGTATCAAAGACCAGATATGGGTCATGCAGTGAATGTCTTGGTTCCTCTCGTAGAGCAATGGAAGCCTACCAGCAACGACGAAGAAGAAGGTTATGGCATTGACATTCACATGAGCCTTCCTCAAGCTCTGCAAAGATGGCAAGCTAACGAAGGCACTTCCACAATGTTTGACATGTCCATCTCACAAACTCAATCAAGCATTCCTGCAAAACCTTCAGGATTTGCTGACTCTTTTGATTCGATGGATTGCCGATGA | 525 | 0.4533 | MKLRTTGRVTTKVDVYAFGVVLMELITGRRALDDTVPDERSHLVSWFRRVLINKENIPKAIDQTLDPDEETMESIYKVAELAGHCTAREPYQRPDMGHAVNVLVPLVEQWKPTSNDEEEGYGIDIHMSLPQALQRWQANEGTSTMFDMSISQTQSSIPAKPSGFADSFDSMDCR | 174 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu6g01460 | 174 | ProSiteProfiles | Protein kinase domain profile. | 1 | 107 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu6g01460 | 174 | SUPERFAMILY | Protein kinase-like (PK-like) | 6 | 120 | IPR011009 | - | |
Vimu6g01460 | 174 | Gene3D | Transferase(Phosphotransferase) domain 1 | 2 | 132 | - | - | |
Vimu6g01460 | 174 | PANTHER | OSJNBA0070M12.3 PROTEIN | 5 | 174 | - | - | |
Vimu6g01460 | 174 | MobiDBLite | consensus disorder prediction | 153 | 174 | - | - | |
Vimu6g01460 | 174 | Pfam | Protein tyrosine and serine/threonine kinase | 7 | 101 | IPR001245 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu6g01460 | Vimu-Chr6 | 14004157 | 14004949 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu6g01460 | 6 | 103 | Receptor kinase-like Gene Family | AT5G56890 | 44.898 | 8.17e-20 | 84.0 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-IX | Vimu6g01460 | PK_Tyr_Ser-Thr | 2.6e-05 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu6g01460 | K00924 | - | gmx:100781851 | 336.65 |