Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01434 ATGGCGTTGAATGCAAGTGGGACGATGTTCCTCTCAATCACGGAAGTGGATGAAAGGAGACAAAGGTACGAGGTATGTCTTGATGCTCCACCCCACATTGTTTCAGATGGGTTATGGCGTAGCCCACAAAATACAAGAGCTCCAATGAGATCTTTTCTCCCCTTGTTTGAGTTACAAGTCCTTCTAATATTTGCCATCACCCAAATCTGTCGGCTCATCCTCATGCCCTTCAAAGTTCCTCTCTTTATTTCCCAGATGATGGCTGGGCTAATTCTGCAAGCTCTTTTTGTGGGGGAACCAGTGGGGTCGTACATGAGGGTGCTGTTTCCGTATGGAACTCACGACACCATCACGACAATAACGTCGATTGGTTTTGTGATTTTCATTTTCATAAACGGTGTGCAGATGGATTTTAGCTTGATAACAAGGATGGGAAAGAAGGCATGGACCATTGCCATTATCGGATTGGTAGTGCCCATACTCACCGCAGCTGCATTCTTGGCCGTACTAACACATCCACTGCTTGAAGTCATCGATCATAACTACAACGGTTTCCTTGTTGCATTGGTCTCCCACACTGTCATTTCATTTGCCGTCATTGCTTCCCTTCTCAATGAACTTCAAATCCAAAACTCCGAACTTGGCAAATTGGCATTGTCTGCCGCATTGGTGAGTGACGTACTGTGCACAATTGGTACCACCATCGGCACTGTTTTTATGTTTAGTGAGGGTGATGGTACCAAAGAGATTGTTACAAACCTCTTGGGTTTGTTTGCAATGGCTATCTTTGTTCCATTGGTGTGTCGCCCAGTAATGTTTTGGATCGTCAGACGTACACCAGAAGGAAGACCTGTCAAAGATGGTTACCTCTACGTCATCATCGTACTGCTCTTTCTCTTAGGTTGGGTTTCGGTTAAAATAAACCAAGAATTCGTGCTCGGGGCTTTCATTCTGGGATTGGCCGTGCCGGAGGGACCTCCTCTAGGAGCTGCATTGGTCAAGAAGCTTAACTTCTTCGGTACCACCTTCCTTCTGCCAATATTCGTCACCATCTGCATGCTGAAAGCAGATTTTTCCTCTACTTATTCCTCCACATCGGTTTTCGCTGTCTGTCTCGTCATCATCCTCACCCACTTGGTCAAAATTGTATCCTGCATTATACCCGCCCTCTACTGCCACATGCCCATCCGTGATGCTCTCTCCCTCTCCCTCATTTTAAACTCCAAAGGCGTTGTGGAAATCGGACTCTATTGCTTCTTATACGACTACAAGGTAATCGATGGGCTGACATACGGAATAATGATTCTGAGCATAATTGTGGTAGCATGCATAGTGCAATGGTCCGTGAGGTTTTTGTACGACCCTTCAAGAAAATACGCCGGGTACCAAAAAAGGAACATCATGAGTTTAAGAGCTTGGTCGGAGCTGAGGATACTGGTGTGCATTCATAAGCCAAGCCACATATCGTCGATGATAGATATGATTGACCTGTGTTGTCCAACGGCAGAAAGTCCGATCATAGTGGATGCATTGCATCTGATAGAGTTGGTGGGACGTGCCTTGCCAATTTTCATCCCGCATCGCATTCAAAGGCAAGAATCAGGGCTTCAACACAGGTCATACTCAGACGACGTAATTCTTGCCTTCGACGTTTACGAGCACGAGAACCCTCATGTGGTGACGGCGTACCCCTGCACCGCAGTGTCTCCACCGAGCCTGATGTACGAAGACGTTTGCAACCTTGCCTTTGACAAGGTGGCGTCCATCATAATTCTTCCGTTTCATCTGAGATGGTCGACGGACGGGGAAGTGGAGTCGGACGAGAAGAGCATAAGGGCACTGAATTGTAGGGTGCTAGAAAAAGCTCCTTGCTCGGTTGGAATCCTGGTGTCGCGAGGTTCGCAGAGAATGAGAGAGGAGTCTTCAATTCGAGTGGGGTTGATTTATTTGGGGGGAGAGGACGACGAGGAGGCGCTGTGCATAGCGAAGAGAGCTATGATGAAGATGGGGATGAAGCTGGTGGTGTACCACCTGGTGTACGAGGCAGAGGAGGAGTGGGATGAAGGGGAAGCCATGGAAGAGATGAAACACAACATAAGATACCAACAGATAGTGGCAAGGGAAGGTTCTGAGACAGCAGCGTTTCTTAGTGAGGTGGCGAAAGAGCATGATTTCTTCATCGTCGGAAGGAGGCATGGGATGGAGTCCCCTCAGACACAAGGACTCACAAACTGGAGTGAATTCCCAGAGTTAGGTGTCATCGGCGACTTTCTGGCGTCGCCGGATTTGGAGAGCCGTGCATCAATTTTGGTGGTGCAGCAACAAACAGAGAAGGGCAATGGGGTAACTATGATCAGTGCTTTCGAATTTGAATTTGGCTCAGTTTGGTGGGGGTGGTTTTTTGCTGTTGTCTTGTGTGCGTTGGCTGCGGTGTTGCCCCGTTTTGTGGGTGTCATTTCGGGGTCGCTGTGGTTTGTTTTCCGGTGCCTTGTGGTTGGTTTTTGGGCACTTTTGATGGCTTCATTGGTTGATGCTTGTACCAACTATCGTGCTATTGGGTCAGCTAGAGGGGCAGATGCTCTGTCATCACTAAATTATAAAGCCTTAAACGAGTCCGCAAAAGTTGTGTTGGATTTTGAGAGAAAGATGGCTGAAGACCGATTTACCGAGCTCCGCAGTCGGATGGCGCAGATTCAGAAGCTTTGTGACGTTGACCATGATTTCAACCCTTTGGAATTGGATACCCCCAATCGCTGCGCCCTTCATCTTGAGAATACACTACAGCACATTGTATCCGACTTCCCTTCTTTCGAAATTCAAGATGCTTACATGCACCATTTGCAAGAGGAGCTTCACACTGTCCACCTTCAATCTGCCCAAATGGCTGACCAGATTGACCTTCTTACCAAAATTCACAACGATGCTGCTGTGAATTTCGTTAGTTATTACTATATCCACTTCATTGACCATCCCTTTGGCACATGTGGAGTTGTAGTGGGGTTTCGTGTGGATCAGAAGAACATATCTGAGGCTACTGAAGGCATTGATGACCCAATTCTAAGAGATGATTGTTCAAATTTGGCTGCTGAAAATGTAGACAAAAATTTAGAGCTATTTGAACTTGAGAATAAGATTGATGAAATGAAGTTGATTCTAAAGTCTCTGCAGGATCTTCAGTTCACAGTGAAGTGGTTTGAAGTTGTAGAGCAGATTGAGGATGCGCTCACGGGTCTAAAAGTGCTTGCATTTGATGAGAATTGCATTAGGTTGTCATTGCACACTCATATGCCATCATTTGAGGACATTTTTTATCAGCTGAGCATTCAAGAAGATACCATTGATGCAGCTGAGCTGAATCATGAGTTGTTAATTGAAGTTTTTGAAGGGACTATGAAGTTAAAGAATGTCCAGATTTCTTGTGGCCACAACTCATGCCTTGACATTCATTTACCACGCAGCAAGTTCTCGTTGCAGTGGTTTATGCAGAAAGTGCAAGATAGAATTATACTAAGCACACTTAGGAGTCTTGTAATAAAGGATGCTAATAAATCTAGATATTCACTTGAATACTTGGACAAAGAAGAGACTATTGTGGCTCATATAGCAGGAGGAACTGATGCGTACATAAAGTTGTCCCATGGCTGGCCCATACTTGGTTCTCCATTGAGGCTGATATGCATAAAGGGATCAGATGATTTGAAGAGAGCTTCTCTGAGTTTTCATTGCAAAGTTGAGAAGTTGGCCAATTCTTTGGATACTCATGTTCGGCAAAATATATCAAGCTTCGTGGATGCTGTTGAAAAAGTAGTCATAGAACAGCTGCAGCTTGATCATACTTCAGGCTAA 3846 0.4566 MALNASGTMFLSITEVDERRQRYEVCLDAPPHIVSDGLWRSPQNTRAPMRSFLPLFELQVLLIFAITQICRLILMPFKVPLFISQMMAGLILQALFVGEPVGSYMRVLFPYGTHDTITTITSIGFVIFIFINGVQMDFSLITRMGKKAWTIAIIGLVVPILTAAAFLAVLTHPLLEVIDHNYNGFLVALVSHTVISFAVIASLLNELQIQNSELGKLALSAALVSDVLCTIGTTIGTVFMFSEGDGTKEIVTNLLGLFAMAIFVPLVCRPVMFWIVRRTPEGRPVKDGYLYVIIVLLFLLGWVSVKINQEFVLGAFILGLAVPEGPPLGAALVKKLNFFGTTFLLPIFVTICMLKADFSSTYSSTSVFAVCLVIILTHLVKIVSCIIPALYCHMPIRDALSLSLILNSKGVVEIGLYCFLYDYKVIDGLTYGIMILSIIVVACIVQWSVRFLYDPSRKYAGYQKRNIMSLRAWSELRILVCIHKPSHISSMIDMIDLCCPTAESPIIVDALHLIELVGRALPIFIPHRIQRQESGLQHRSYSDDVILAFDVYEHENPHVVTAYPCTAVSPPSLMYEDVCNLAFDKVASIIILPFHLRWSTDGEVESDEKSIRALNCRVLEKAPCSVGILVSRGSQRMREESSIRVGLIYLGGEDDEEALCIAKRAMMKMGMKLVVYHLVYEAEEEWDEGEAMEEMKHNIRYQQIVAREGSETAAFLSEVAKEHDFFIVGRRHGMESPQTQGLTNWSEFPELGVIGDFLASPDLESRASILVVQQQTEKGNGVTMISAFEFEFGSVWWGWFFAVVLCALAAVLPRFVGVISGSLWFVFRCLVVGFWALLMASLVDACTNYRAIGSARGADALSSLNYKALNESAKVVLDFERKMAEDRFTELRSRMAQIQKLCDVDHDFNPLELDTPNRCALHLENTLQHIVSDFPSFEIQDAYMHHLQEELHTVHLQSAQMADQIDLLTKIHNDAAVNFVSYYYIHFIDHPFGTCGVVVGFRVDQKNISEATEGIDDPILRDDCSNLAAENVDKNLELFELENKIDEMKLILKSLQDLQFTVKWFEVVEQIEDALTGLKVLAFDENCIRLSLHTHMPSFEDIFYQLSIQEDTIDAAELNHELLIEVFEGTMKLKNVQISCGHNSCLDIHLPRSKFSLQWFMQKVQDRIILSTLRSLVIKDANKSRYSLEYLDKEETIVAHIAGGTDAYIKLSHGWPILGSPLRLICIKGSDDLKRASLSFHCKVEKLANSLDTHVRQNISSFVDAVEKVVIEQLQLDHTSG 1281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01434 1281 PANTHER CATION/H + ANTIPORTER 33 777 - -
Vimu6g01434 1281 Pfam Sodium/hydrogen exchanger family 61 445 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vimu6g01434 1281 Coils Coil 1038 1058 - -
Vimu6g01434 1281 Gene3D - 56 460 IPR038770 -
Vimu6g01434 1281 Coils Coil 881 901 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01434 Vimu-Chr6 13856500 13864509 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01434 22 780 Antiporter Super Family AT2G28180 35.088 6.80e-143 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01434 K26731 - gmx:100785062 1136.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01434 6 13856500 13864509 Vimu6g01434 6 13856500 13864509 ECH