Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01367 ATGCCTAGATCAACAGATCCTCTTGTTATAGGAGGTGTAATAGGTGATGTTTTGGAGCCATTTACAAGTTCTGTTTCTCTCAGAATACTTTACAACAATTCCTTTCATGTTATCAACTGTTGTGAGCTCAAACCCTCACAAGTCCTGAACCAACCAAGAGTTGAAATTGGTGGAAATGATTTCAGAACCCTTTACACTCTGGTGATGGTGGATCCTGATGCACCTAGTCCAGGAAATCCAAATCAGAGGGAATATCTGCACTGGTTAGTAGCCAATATTCCAGGAACTACAGGAACAAACTTCGGTGAAGAGGTTGTGGGATATGAAGCTCCACGACCTATGATGGGGATTCATCGTATTATTTTCATACTGTTTCGTCAACCTAGCAGACAAACTGTGTATGCTCCAGGATGGCGACAAAATTTCAACACCAGAGATTTTAGTGAGATTTATAATCTTGGATCACCAGTTGCAGCAGCCTACTTCAACTGCAAACGACAACTTGATTCTACTCGAAGGAGATAA 525 0.4133 MPRSTDPLVIGGVIGDVLEPFTSSVSLRILYNNSFHVINCCELKPSQVLNQPRVEIGGNDFRTLYTLVMVDPDAPSPGNPNQREYLHWLVANIPGTTGTNFGEEVVGYEAPRPMMGIHRIIFILFRQPSRQTVYAPGWRQNFNTRDFSEIYNLGSPVAAAYFNCKRQLDSTRRR 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01367 174 SUPERFAMILY PEBP-like 12 166 IPR036610 -
Vimu6g01367 174 CDD PEBP_euk 25 164 IPR035810 -
Vimu6g01367 174 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 65 87 IPR001858 -
Vimu6g01367 174 Pfam Phosphatidylethanolamine-binding protein 61 161 IPR008914 -
Vimu6g01367 174 Gene3D - 2 173 IPR036610 -
Vimu6g01367 174 FunFam Terminal flower 1 1 174 - -
Vimu6g01367 174 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 11 167 IPR035810 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01367 Vimu-Chr6 13300477 13302045 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01367 K16223 - gmx:100815541 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01367 6 13300477 13302045 Vimu8g01170 8 18719411 18721754 PCT