Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01348 ATGGCTACCATTTCCCTCAGGCATAACCCTCAAGTCAACAACACCAACCAGCAACGTGAAATCATCACCGAAGAGATCCAAGGACTCATTAGAGTCCAAAGAGATGGACGTGTAGAGAGACCACCGATTGTGCCTACTGTCTCCTGCACAGTCTCATCATCATCATCGTCTTCAAGTGCCAAAGATGTTATCATCAACAAAGAGACAAACTTATGGGCACGTGTTTATGTGCCTTCAATGAGTTATCACACAAAGTCTCTTCCTTTGCTTGTGTACTTCCACGGTGGTGGATTCTGTATTGGTTCTGCTGCTTGGAGCTGTTACCACGAGTTTTTGACCAACCTTGCTTCCAAAGCAAACTGTGTCATTCTCTCTGTGGATTATCACTTAGCCCCAGAGAATCGTCTTCCTGTGGCATACGATGACGGTTTCAACGCGCTCGCGTGGGTCAAAAGAGAAGCGATGAACATCTCCGGCGCGCAAAAGTGGTGGCTGACTCACTGCGACATGTCTTCCGTTTTCCTCGCCGGTGATAGTGCAGGTGCCAACATAGCTTATAATGTGGCCACCCGCATGGGATCATCATCATCATCGTCATCAAACACGACGACACCATTATCCCTCAAGGGTGTCATACTGATCCAACCTTTCTTCGGAGGAGAAGAAAGAACTAGCTCTGAGAAGCATTTCCTTCAGCCACCCAATTCAGCGCTCACTTTATCCGTTTCCGACACTTATTGGCGCTTGGCGCTTCCTCTCGGAGCCACCCGTGACCACCCATAG 783 0.4866 MATISLRHNPQVNNTNQQREIITEEIQGLIRVQRDGRVERPPIVPTVSCTVSSSSSSSSAKDVIINKETNLWARVYVPSMSYHTKSLPLLVYFHGGGFCIGSAAWSCYHEFLTNLASKANCVILSVDYHLAPENRLPVAYDDGFNALAWVKREAMNISGAQKWWLTHCDMSSVFLAGDSAGANIAYNVATRMGSSSSSSSNTTTPLSLKGVILIQPFFGGEERTSSEKHFLQPPNSALTLSVSDTYWRLALPLGATRDHP 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01348 260 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 173 185 IPR033140 -
Vimu6g01348 260 PANTHER ARYLACETAMIDE DEACETYLASE 25 260 - -
Vimu6g01348 260 Gene3D alpha/beta hydrolase 27 260 IPR029058 -
Vimu6g01348 260 SUPERFAMILY alpha/beta-Hydrolases 59 260 IPR029058 -
Vimu6g01348 260 Pfam alpha/beta hydrolase fold 90 260 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01348 Vimu-Chr6 13180261 13181139 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01348 1 260 Carbohydrate Esterase AT5G16080 57.090 4.05e-100 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01348 - - gmx:100804774 404.831