Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01337 ATGGCTATGGTGGTCCTCACACCCCTTTTGCTCATACTCCCTATTCTCCTACTTAAACTCCTCTACGACAACCTCTCGTGTTACTGGTTCACCCCTCTACGCATAAAAAAGATCATGGAGATGCAAGGAAAGAGGTTTCTATATTGGAATGGAACAGAACCGAGGCTTTGTCTCACTGAGACCGAATTGATCAAAGAGTTCCTTTCAAAATACAGTACGGTATCTGGGAAATCCTGGCAGCAAAGGCAGGGTTCAAAGAATTTCATTGGGCAAGGACTGTTGATGGCAAATGGTGAAGATTGGTACCACCAACGTCACATCGTTGCCCCTGCATTCATGGGAGACAGACTTAAGAGCTATGCTGCGCACATGGTGGAATGCACTAAGGAGATGCTCCAATCACTCAAAATTGCGTCAGAATGTGGCCAAACTGAGGTGGAGATTGGTCACTACATGACTAAACTCACTGCAGATATTATCTCTAGGACTGAGTTTGGTACAAGCTATCAGAAAGGGAAGAAAATATTCCACCTCCTCACACTGCTGCAGAGTCGTTGTGCTCAAGCAAGTCGTCATCTTTGCTTTCCCGGAAGCAGGTTTTTTCCAAGCAAGTATAACAGAGAGATAAAGTGTTTGAAGATGGAGGTGGAGACTCTGCTGATGGAGATCATACAAAGCAGAAAAGACTGTGTGGAGATAGGAAGAAGCAACTCTTATGGGAATGATCTGTTGGGTATGCTCCTGAACGAGATGCAGAAGAAAAAAGGGAATGGAAACAGCATCAGTCTGCAGCTAGTGATGGATCAATGCAAAACATTTTTCTTTGCCGGACACGAAACCACTGCCCTTTTACTCACTTGGACAGTCATGTTACTCGCCAGCAACACATCATGGCAGGACAAAGTCCGAGAAGAGGTTAGAACTGTCTGCAATGGTGAAATTCCTACTTTGGATCACCTCTCCAAGCTCACTCTTTTGCACATGGTGATAAACGAATCACTGAGGTTGTATCCTCCAGCATCGGTGCTTCCGAGAATGGTGTTTGAAGACATAGTACTAGGTGATCTTTACATCCCAAAGGGTCTGTCGATTTGGATCCCTGTGTTGGCCATTCATCACAGCGAAAAGCTATGGGGAAAAGATGCAAACGAGTTCAACCCAGAGAGGTTCAGTTCGAAGTCATTCGTTCCTGGTCGTTTTCTACCGTTTGCTTCTGGTCCCAGAAATTGCGTTGGACAAGCCTTTGCTTTAATGGAAGCTAAGATCATATTAGCCATGTTGATTTCTCGGTTCAGCTTCACCATTTCTGAAAATTACCGTCATGCCCCCGTCGTCGTTCTCACCATCAAGCCCAAATATGGGGTTCAGGTTTGTTTGACGCCATTGGAGCCATGA 1395 0.453 MAMVVLTPLLLILPILLLKLLYDNLSCYWFTPLRIKKIMEMQGKRFLYWNGTEPRLCLTETELIKEFLSKYSTVSGKSWQQRQGSKNFIGQGLLMANGEDWYHQRHIVAPAFMGDRLKSYAAHMVECTKEMLQSLKIASECGQTEVEIGHYMTKLTADIISRTEFGTSYQKGKKIFHLLTLLQSRCAQASRHLCFPGSRFFPSKYNREIKCLKMEVETLLMEIIQSRKDCVEIGRSNSYGNDLLGMLLNEMQKKKGNGNSISLQLVMDQCKTFFFAGHETTALLLTWTVMLLASNTSWQDKVREEVRTVCNGEIPTLDHLSKLTLLHMVINESLRLYPPASVLPRMVFEDIVLGDLYIPKGLSIWIPVLAIHHSEKLWGKDANEFNPERFSSKSFVPGRFLPFASGPRNCVGQAFALMEAKIILAMLISRFSFTISENYRHAPVVVLTIKPKYGVQVCLTPLEP 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01337 464 PRINTS E-class P450 group I signature 265 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01337 464 PRINTS E-class P450 group I signature 155 173 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01337 464 PRINTS E-class P450 group I signature 368 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01337 464 PRINTS E-class P450 group I signature 410 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01337 464 PRINTS E-class P450 group I signature 285 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01337 464 PRINTS E-class P450 group I signature 400 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01337 464 PRINTS P450 superfamily signature 401 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01337 464 PRINTS P450 superfamily signature 410 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01337 464 PRINTS P450 superfamily signature 276 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01337 464 PRINTS P450 superfamily signature 328 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01337 464 SUPERFAMILY Cytochrome P450 20 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01337 464 Pfam Cytochrome P450 35 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01337 464 Gene3D Cytochrome P450 29 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01337 464 PANTHER CYTOCHROME P450 FAMILY MEMBER 41 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01337 Vimu-Chr6 13064004 13067270 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01337 1 324 Cytochrome P450 AT5G38450 58.466 9.11e-134 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01337 K10717 - gmx:100808392 835.869