Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01326 ATGACAGGTTGTCTCGTTCGTCTTATCCTATGCACCCATGAGACACTCTCTTGTTTCCACGCGCCTCACTACCATAACCACAAGAACCTTAGCTTAGCTTTGGTTTGCAGTGGCATTAGCAGCATTGGTGCTGCCTGTGATTTAAGTTGCCATTCTTTTCGTGGCTGTCACAGAGGTTCAGCAGAGTTGTTCCCATGTCTTTTGTGGATAACATTATTGTACCTTGTTTCCATAAGTGAGAGTCAGGTTTTGCAACTGGTGTCGGTGGTTCTGGGGAGTGTTGCAGAAATGAATGATTCCACGGCGAGGAATTTGGCTATCACGGAGAGGAAGGTGCAGCAGAAGCCGGGTGGTTGTGTCGGCATTTTCTTTCAGCTCATTGACTGGAAGAGGAAGCTCTCCAAGAAGAAGCTCTTCTCCAAGAAGCTTCTTCCTCCAGTGATTGTTCTTGGTTTGTGGCGACTGATATATGTTCTTGTTGTTGAGTGTTTATCAGCTCGTGCGAAAAAGTTCAAGGGGGATGAAAAGATGCCAAATTCCAAGATTCACTTGATTGCTAATGAGAACAGTGGAGGTTTCCCAAGTGCTAATAAAAAAGGTGGGAATCATGGCGTAGATGTAGAGCAGAAGAGTGAAATGCGAGTTCCGAGTCTGGTGGCCAGGTTGATGGGTCTAGAATCTATTCCGACTGCTCAGCGAGATAAGTCCAAGAAAGCCTTGTGTGGTGATGGGAAGAACGAGTCTTTGGGTGGTGACCATGGTGAGTTGGATAGGCAAGGCATGGGTTTGGAAATGGGAGTTGTGAAGCATGATTCAAGACCTCAGAAGCTTCAGAAAACCGGGTCCTATGAGAGAAGGGCAGTGACTAGGTTTGGAGCTGAGGCTTTCCAAATTAAGAGTGTATTATCACGAGGAAGAAAGTATCATCACCACCATCATCATCATCCAAAGCTTGCTTCTTCTTTGAAGAGTCCGAGAATCCCTTCCGGAAAGAGTGCTTCTCGAAGCTCTAGGTTAATAGGAGCAGCTACTAAAATTTTGGAACCTGGACTGCAAAGCAGAAGTAGGGCCAAAGGTTCTCTTGCATATCCTGCTTCCATGTACCCTCCCAAGACTGGTATTGTGACCAATGATGTGCAAAATCAATCTTGTTATGAAGCTGGCTCATGCAAGCAATTGATGGAGCAGACCTCTTGCAAAAACTGTGGTAATCTGCTAGACGTAGTTGACTGCAAGCTTGAGGTTGGGGGACAGCCACTGGATCCTCCACCCGTTGTTTCTGATGTGATCACAGTTTCCTCTATGGAATCATCAGAGAAGAAGGGAAAGTCATTAACTTCCCTTGGACATGACAGAGATGTAGTTCTTCTGAGAAGCCAGGAAAAGTTCATATCTCTTGATACTGAAGAGAAGGGGAAAAATAATGCACATAAGTCATGGAATGAGCCCACTGTTAGAAGAATGTCAATGCCCCATGATTGTCTACCTAAATGGAATTCATCTTGCCAACCATCAAGGACCCTGGAGGATGATGCATCTTCTTTTCGCTCAAAACACAAAACTCAAACACAAGAACAGATGTTAAGCAGTGAAAGATATTCATCTGGATCTACAATGAGCGATATGCAAGTAAAAGGGGTATCATCATCTACAAGTGCTATGAATGGTGCTAAGGACTTTGTTTCTATGAATAGAAGTCTTACTGGTCGAACAAGGACAAGATCACCTACCAAAGCTGACAGTTGTAGATTTGACCTAGAGAGAAAACCTTATAGTCGACAGCATAATTCTTTGTCTCACGTAAGAACATTTGAGAGAAAAAGAAGGATCCCAAATGCCACTCAACTAGAAGGCACAGGTTCTGTTTATTCAGTTGGTGCAAAACAGAGAAATCTCCATTCTAATGCACTGGGTGGCAAAAGAAGGGACTCCAATGCTTCCTCCTTGAACAATTCCATTATAAGAAATAAGCAAGTTGCTCAAGGAGAAAGAATTATTAAGGTTAAGGACAACAAGATCGATGACGTAGTGTCATTTACATTTAATTCCCCCTTGAAGCAAAAGATAGGAGTAACTGTTGACAGGGAAGAGACAAGCACTGACAATGAGAGTATTAAAAGGCCTAAACCATTGAGAGTTGATGCTTTAGGTGCCTTTCTAGAACAAAAATTGAAGGAATTAACCTCTCAAAGAGACGAAGAATTGGCTACAGGTGTTCCGCCTAAAAAATCAAGTGCCATGATTCTTCAAGAGCTGATATCTGCTTTAAGTTCAGAGCATTTGATCTGTCATGATGGTCATCATGTGTTTAATGAAAATGTTGGTTTGCATTATGGGGAAAAACAAGAAAGGTTATTAGGAACCTCTTGCAATGGTAATCATCTCAGTCCCGGATCTGTTTTGGAAGCTTCCTTTTCTTCCAGTAGTCTGGATGAAAGCTCAGGGCATTGTTTTCACCCTGATTCCATGAATCACTCTTGTTATGGTCAACTAGAACATGAAGCTGAACTTTCAGATTCCGCAACATCCTTTACCAAAGGGAGGATAGGTGAGATACTGAGTGATCTTGTCAGCCAACTTCCCAGGGCATTGGAAAGTTTGCACACTTATGGGACAGAATTAACAATAAGCAAGCTTAACCATATGAAGGATATTCTCATGCATGCTGAGTTGGTGCTTGGAATTACAACTGATCGCAGACAGGATGATGGGCCACAACTTATAATTCATCGGTTTCTCGTTGATGATCTTGAGAGCATGACGAGTGATACCATGTGGACAGATGTGAGTTGTGAGGATTCTAAACAGAGAAAGGAACTAAAGGGTTTTCTCCTTGACTGTGTTGTGGAATATCTAGAATCAAACTGCAGCCTTTATTTTAACTCTGGATTCAGGGCATGGACAAAGTTACCTTTATGCATGAGAGCTGAGATGTTGGCCAAAGAGGTGAAGAGGGAGATCAACAAATGGTTATCTATGGTTGGGATGGTACCTGATGAAATAATAGAATGGGAAATGAGCCACTCCTTGGGGAAATGGACTGACTTTGGTATTGAAGCATGTGAGGCTGGTGTTGATATAGATGGGGATATACTTCAAATTTTGGTTGATGAAGTTGTTGAAGACCTTGTAGGTTTCACTCATGGCTCCATCACCTTCTAA 3162 0.4269 MTGCLVRLILCTHETLSCFHAPHYHNHKNLSLALVCSGISSIGAACDLSCHSFRGCHRGSAELFPCLLWITLLYLVSISESQVLQLVSVVLGSVAEMNDSTARNLAITERKVQQKPGGCVGIFFQLIDWKRKLSKKKLFSKKLLPPVIVLGLWRLIYVLVVECLSARAKKFKGDEKMPNSKIHLIANENSGGFPSANKKGGNHGVDVEQKSEMRVPSLVARLMGLESIPTAQRDKSKKALCGDGKNESLGGDHGELDRQGMGLEMGVVKHDSRPQKLQKTGSYERRAVTRFGAEAFQIKSVLSRGRKYHHHHHHHPKLASSLKSPRIPSGKSASRSSRLIGAATKILEPGLQSRSRAKGSLAYPASMYPPKTGIVTNDVQNQSCYEAGSCKQLMEQTSCKNCGNLLDVVDCKLEVGGQPLDPPPVVSDVITVSSMESSEKKGKSLTSLGHDRDVVLLRSQEKFISLDTEEKGKNNAHKSWNEPTVRRMSMPHDCLPKWNSSCQPSRTLEDDASSFRSKHKTQTQEQMLSSERYSSGSTMSDMQVKGVSSSTSAMNGAKDFVSMNRSLTGRTRTRSPTKADSCRFDLERKPYSRQHNSLSHVRTFERKRRIPNATQLEGTGSVYSVGAKQRNLHSNALGGKRRDSNASSLNNSIIRNKQVAQGERIIKVKDNKIDDVVSFTFNSPLKQKIGVTVDREETSTDNESIKRPKPLRVDALGAFLEQKLKELTSQRDEELATGVPPKKSSAMILQELISALSSEHLICHDGHHVFNENVGLHYGEKQERLLGTSCNGNHLSPGSVLEASFSSSSLDESSGHCFHPDSMNHSCYGQLEHEAELSDSATSFTKGRIGEILSDLVSQLPRALESLHTYGTELTISKLNHMKDILMHAELVLGITTDRRQDDGPQLIIHRFLVDDLESMTSDTMWTDVSCEDSKQRKELKGFLLDCVVEYLESNCSLYFNSGFRAWTKLPLCMRAEMLAKEVKREINKWLSMVGMVPDEIIEWEMSHSLGKWTDFGIEACEAGVDIDGDILQILVDEVVEDLVGFTHGSITF 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01326 1053 MobiDBLite consensus disorder prediction 325 339 - -
Vimu6g01326 1053 MobiDBLite consensus disorder prediction 505 543 - -
Vimu6g01326 1053 Pfam Domain of unknown function (DUF4378) 880 1038 IPR025486 -
Vimu6g01326 1053 MobiDBLite consensus disorder prediction 519 543 - -
Vimu6g01326 1053 MobiDBLite consensus disorder prediction 304 339 - -
Vimu6g01326 1053 MobiDBLite consensus disorder prediction 234 257 - -
Vimu6g01326 1053 Pfam DUF761-associated sequence motif 208 234 IPR032795 -
Vimu6g01326 1053 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 104 1042 - -
Vimu6g01326 1053 MobiDBLite consensus disorder prediction 304 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01326 Vimu-Chr6 12953030 12957829 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01326 94 1043 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 30.598 1.43e-77 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01326 - - gmx:100813026 1465.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01326 6 12953030 12957829 Vimu6g01326 6 12953030 12957829 ECH