Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01262 ATGTTCGTTTCCAATTTCCTTGCTTGCGATGCAGATCCTGTTGATCGGAACAAGAAGAATGACCGAAGACAAAAAGGGATTGGCAATAGGAATCGACCTGGCACAACATACTCCTGTGTTGCAGTATGGCAGCAACAACATAACAGGGTGGAGATCATTCATAATGATCAAGGCAACAATACCACTCCTTCTTGTGTTGCTTTCACGGACCATGAAAGGTTGATAGGAGATGCTGCTAAAAATCAGGCTGCTTCCAATCCAGAGAACACCATCTTCGATATAGTTGTTATTGAATACATTCTGGAAGATCTAAAAGCAATACGAATTATGGTATTGGAAAAGGTTGGTAAAAGGAAAAGAGAGTCATAG 369 0.4092 MFVSNFLACDADPVDRNKKNDRRQKGIGNRNRPGTTYSCVAVWQQQHNRVEIIHNDQGNNTTPSCVAFTDHERLIGDAAKNQAASNPENTIFDIVVIEYILEDLKAIRIMVLEKVGKRKRES 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01262 122 PANTHER HEAT SHOCK PROTEIN 70KDA 34 95 IPR013126 GO:0005524|GO:0140662
Vimu6g01262 122 FunFam heat shock 70 kDa protein-like 23 119 - -
Vimu6g01262 122 MobiDBLite consensus disorder prediction 14 28 - -
Vimu6g01262 122 MobiDBLite consensus disorder prediction 14 33 - -
Vimu6g01262 122 Pfam Hsp70 protein 34 94 IPR013126 GO:0005524|GO:0140662
Vimu6g01262 122 Gene3D - 15 115 - -
Vimu6g01262 122 SUPERFAMILY Actin-like ATPase domain 34 95 IPR043129 -
Vimu6g01262 122 PRINTS 70kDa heat shock protein signature 79 87 - -
Vimu6g01262 122 PRINTS 70kDa heat shock protein signature 57 69 - -
Vimu6g01262 122 PRINTS 70kDa heat shock protein signature 27 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01262 Vimu-Chr6 12598513 12600627 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01262 34 93 Calmodulin-binding Proteins AT3G12580 80.000 5.55e-27 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01262 K03283 - gmx:102667572 119.012