Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01248 ATGGCCGGAAAGGGGGAAGGACCTGCCATCGGAATCGACCTCGGCACCACCTACTCTTGCGTCGGCGTGTGGCAGCACGACCGAGTCGAGATCATTGCCAACGACCAGGGCAACCGTACAACGCCCTCTTACGTCGCCTTCACCGACACTGAGAGGTTGATCGGTGATGCTGCTAAGAACCAGGTCGCCATGAATCCCATCAACACCGTCTTCGGTAACTCATCGTTTTCTCTTCAAAACTTTAACCTAAATCTGCTGGTTTTGACATGCCTTGTATATTTTGTTCTCAGCTCTTATCTTGTTTCCATTGTACCGAATTCATGTTTCGTTCTATTCGATCACGGGGAATGTCTATTTCTTTTTAAATTGGCAGAAAAAAAAAGTGTTTTTTGCTTTATGGGCTAG 405 0.4716 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPINTVFGNSSFSLQNFNLNLLVLTCLVYFVLSSYLVSIVPNSCFVLFDHGECLFLFKLAEKKSVFCFMG 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01248 134 SUPERFAMILY Actin-like ATPase domain 8 81 IPR043129 -
Vimu6g01248 134 Gene3D - 2 97 - -
Vimu6g01248 134 FunFam Heat shock 70 kDa protein 1A 2 100 - -
Vimu6g01248 134 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Vimu6g01248 134 PANTHER HEAT SHOCK PROTEIN 70KDA 9 80 IPR013126 GO:0005524|GO:0140662
Vimu6g01248 134 Pfam Hsp70 protein 9 72 IPR013126 GO:0005524|GO:0140662
Vimu6g01248 134 PRINTS 70kDa heat shock protein signature 58 66 - -
Vimu6g01248 134 PRINTS 70kDa heat shock protein signature 8 21 - -
Vimu6g01248 134 PRINTS 70kDa heat shock protein signature 36 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01248 Vimu-Chr6 12512695 12514157 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01248 1 71 Calmodulin-binding Proteins AT3G09440 98.592 4.39e-46 156
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01248 6 12512695 12514157 Vimu6g01248 6 12512695 12514157 ECH