Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu6g01237 | ATGGATAACTATGGATCATCTTCTCCATACCGGTATCCAAGCCCATATGGGTACCCTTCCAACCCTCATCAACCATACCCTCCTCCTCCAGTTTCAGCTCCTGATCCATATGCACAAGCTCCTTATCCTTCATATCCTTACCTTTCTTCACATTCCTTCAACTATTCTCACCATGGACCTCCTAGACCTTCTTCACATTCTGGCCATTTTGAGTATTCTTATCCTCCTAACGCCATGGATTTTTCTCACCCTCCTCCACCATCTTATGCTCCTCCTCCCACTTATCCTTATCCCTACCATGTGCCTCCACCGAATCATGGCTCTCCTGGGCCTCCCCCTTTTCACCAGCCCAGTTACCAATATGGTTCACCTCAATACTATTATCCACCAAAAGAGTCCTATTCGCCGCCTCCTGATATCCATTCCGGCACCAATAGCTTCTCTAGTCCCTATTGGCAGGATAATACAAGCACTGCTGAAGGAGGTAAAGTGTCACAAAGTAGTGACAATTCCATTTCCATGCATTCTCAGGGTTCTTCTTACCCAGCTCTGGATGATCTTATGAGCAATGTTAGGTTGTCTGATGGCCAACCAACTGCTCCTGCATCACCTCCTGCGCCTGCAGGGCATCCGCTTATGCATTCCATTTCAGTTCCTAAGTTGCAACAGAAGAAGGAGGAGGAGTTTTATGGATATTCTAATAACTCCTTCTCAGGGTGGGGATCCTCCTATCCCACTCGGATGAATTCTTCTAGTCTTTCAGATTTTTCTGGCTCATTTAACGAATCAGTGTATGGTGAGCGTTTGCAGATTGTTCCAGTGCAGAATAAAGGGTCCTTGAGAGTTTTGCTCCTCCATGGAAATTTAGATATATGGGTCCATGAAGCCAAGAATCTTCCAAATATGGACATGTTTCACAAAACTTTAGGTGATGTGTTTGGTAAATTGCCTGGTGGTGTGAGCAATAAAATTGAAGGAACTATGAATAAGAAGATTACCAGTGATCCTTATGTATCGATTTTAGTATCCAATGCTGTAATTGGGAGGACTTATGTCATTAGCAACTCTGAAAACCCTGTTTGGTGGCAACATTTCTATGTTCCTGTCGCACATCATGCTGCAGAAGTACACTTTCTTGTTAAAGACAGTGATATTGTGGGTTCACAGCTCATTGGCATTGTGGCAATTCCAGTGGAGCGAATATACTCAGGAGAAACAGTTGAAGGTTTTTTCCCTATCCTGAATAGTAATGGGAAGCCGTGTAAGCAAGATGCTGTCCTGAGACTATCCATTCAGTACATACCTATGGAGAAAATGAGCATTTATCACAAAGGAATTGGAGCAGGGCCTGAATACGTGGGGGTTCCTGGAACATATTTTCCTTTGAGGAAAGGTGGAACTGTTACTCTGTATCAAGATGCTCATGTTCCAGATGGAAGCCTCCCTAATGTGTTGCTTGACAGTGGGATGTACTATGCGCATGGAAAGTGTTGGCAAGATATCTTTGACGCCATAAGTCAAGCTCGGCGTTTGATTTATATTACAGGTTGGTCAGTGTGGCACAAAGTAAGGTTGATTAGGAATGCTGCTGGTTATTCTCCAGATTATACCTTGGGTGATCTTCTGAGGTCAAAGTCACAGGAAGGAGTAAGAGTGCTTCTGCTTATCTGGGATGATCCTACATCAAGAAGCATTTTAGGTTATAAAACAGATGGTGTCATGGCAACTCATGATGAGGAAACTCGACGATTTTTCAAGCACTCTTCAGTGCAAGTGCTTCTTTGTCCTCGCAGTGGTAAACGACATAGCTGGATCAAGCAAAAGATTCCTGAATTATACAGTGGAACAATTGTGAATGTGATGATTGGACTGGATTTAATATGCCGAGTCTGCAAGTGTACTATCTGCGAAGTTGGAACAATATATACACATCATCAGAAAACTGTTATTGTGGATGCTGATGCTGGAAGTAATAGAAGAAAAGTGATAGCATTTGTTGGTGGACTTGATTTGTGTGACGGGCGATATGATACTCCCCACCACCCTATTTTTAGATCATTGAATACAGATCATAAGGATGACTACCACAACCCCACTTTCACGGGTAATGTTGGTGGTTGTCCTCGGGAGCCATGGCACGATTTGCATTCTAAAATTGATGGTCCAGCAGCTTATGATGTTTTAACTAACTTCGAGGAGCGCTGGTTAAAAGCTTCAAAACCTCACGGGATTAAAAAGTTGACTACTTCATACGATGATGCTTTGCTAAGGTTGGAAAGAATTCCAGATTTTATTGGCATCAATGATGCTCCAAGTGTTGGTGAAGATGATCCTGAAGTTTGGCATGTTCAGATATTTCGTTCAATTGATTCAAATTCGGTTAAGAGATTTCCGAAGGATCCAAAAAATGCAACAAGCAAGGTGAATGAGAAGCCTTGTGCTGATAACTTAATCCCAATGGAAATTGCTCTAAAGATTACTGAAAAGATAAAAGCACATGAAAGATTTGCAGTGTATATTGTTATTCCCATGTGGCCGGAAGGAGTTCCAACAGGGGCTGCAACGCAAAGGATTCTATTTTGGCAGAATAAAACAATGCAAATGATGTATGAGACCATTTACAAGGCTTTGGTTGAAGCAGGGCTTGAAGCAGCATTTTCTCCACAAGATTATTTGAACTTTTTCTGTCTTGGTAATCGAGAGGCCATCAGTATGTATGATAATGTTGGTGTGACAGGATCTCCTCCCCCAGCAAATAGTCCTCAATTGGCTAGCCGAAATAGCCGACGTTTCATGATTTATGTTCACTCAAAAGGCATGATAGTTGATGATGAATATGTGATATTGGGGTCTGCAAACATCAACCAGCGCTCCATGGAAGGAACAAGGGACAGTGAGATTGCAATGGGTGCCTATCAACCTCATTATACATGGGCAAAAGCACAAACTTATCCACACGGTCAAATCCATGGATATAGGATGTCCCTTTGGGCAGAACATACAGGAACAATTGAGGACTGCTTCTTGCAACCTGAGAGTCTTGAATGTGTAAGTAGGATTAGAGCAATGGGAGAAATGAACTGGAAACAATTTGCAGCAGATGAAGTAACAGAGATGAGAGGGCATCTACTGAAATACCCTGTAGAAGTTGATAGAAAGGGCAAGGTTAGATCACTTCCAGACCAAGAAGAGTTCCCTGATGTGGGAGGAAAAATAGTTGGATCTTTTCTTGCCATGAAGGAGAATCTAACCATTTGA | 3258 | 0.4248 | MDNYGSSSPYRYPSPYGYPSNPHQPYPPPPVSAPDPYAQAPYPSYPYLSSHSFNYSHHGPPRPSSHSGHFEYSYPPNAMDFSHPPPPSYAPPPTYPYPYHVPPPNHGSPGPPPFHQPSYQYGSPQYYYPPKESYSPPPDIHSGTNSFSSPYWQDNTSTAEGGKVSQSSDNSISMHSQGSSYPALDDLMSNVRLSDGQPTAPASPPAPAGHPLMHSISVPKLQQKKEEEFYGYSNNSFSGWGSSYPTRMNSSSLSDFSGSFNESVYGERLQIVPVQNKGSLRVLLLHGNLDIWVHEAKNLPNMDMFHKTLGDVFGKLPGGVSNKIEGTMNKKITSDPYVSILVSNAVIGRTYVISNSENPVWWQHFYVPVAHHAAEVHFLVKDSDIVGSQLIGIVAIPVERIYSGETVEGFFPILNSNGKPCKQDAVLRLSIQYIPMEKMSIYHKGIGAGPEYVGVPGTYFPLRKGGTVTLYQDAHVPDGSLPNVLLDSGMYYAHGKCWQDIFDAISQARRLIYITGWSVWHKVRLIRNAAGYSPDYTLGDLLRSKSQEGVRVLLLIWDDPTSRSILGYKTDGVMATHDEETRRFFKHSSVQVLLCPRSGKRHSWIKQKIPELYSGTIVNVMIGLDLICRVCKCTICEVGTIYTHHQKTVIVDADAGSNRRKVIAFVGGLDLCDGRYDTPHHPIFRSLNTDHKDDYHNPTFTGNVGGCPREPWHDLHSKIDGPAAYDVLTNFEERWLKASKPHGIKKLTTSYDDALLRLERIPDFIGINDAPSVGEDDPEVWHVQIFRSIDSNSVKRFPKDPKNATSKVNEKPCADNLIPMEIALKITEKIKAHERFAVYIVIPMWPEGVPTGAATQRILFWQNKTMQMMYETIYKALVEAGLEAAFSPQDYLNFFCLGNREAISMYDNVGVTGSPPPANSPQLASRNSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDSEIAMGAYQPHYTWAKAQTYPHGQIHGYRMSLWAEHTGTIEDCFLQPESLECVSRIRAMGEMNWKQFAADEVTEMRGHLLKYPVEVDRKGKVRSLPDQEEFPDVGGKIVGSFLAMKENLTI | 1085 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vimu6g01237 | 1085 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
| Vimu6g01237 | 1085 | MobiDBLite | consensus disorder prediction | 138 | 184 | - | - | |
| Vimu6g01237 | 1085 | ProSiteProfiles | C2 domain profile. | 265 | 411 | IPR000008 | - | |
| Vimu6g01237 | 1085 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 640 | 675 | IPR001736 | GO:0003824 | |
| Vimu6g01237 | 1085 | MobiDBLite | consensus disorder prediction | 15 | 37 | - | - | |
| Vimu6g01237 | 1085 | MobiDBLite | consensus disorder prediction | 79 | 118 | - | - | |
| Vimu6g01237 | 1085 | SMART | C2_3c | 288 | 410 | IPR000008 | - | |
| Vimu6g01237 | 1085 | Pfam | Phospholipase D C terminal | 1005 | 1075 | IPR024632 | - | |
| Vimu6g01237 | 1085 | Pfam | C2 domain | 287 | 413 | IPR000008 | - | |
| Vimu6g01237 | 1085 | SUPERFAMILY | Phospholipase D/nuclease | 497 | 740 | - | - |
Showing 1 to 10 of 25 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vimu6g01237 | K01115 | - | gmx:100791059 | 1699.49 |
Showing 1 to 1 of 1 entries