Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01204 ATGAATATACCATTGTTAATTTCAGATTCATCTGAGGTGGATGATGAAGAATGTGGTTTGAATGTTTCAAGTGATGAAGATTGTGAGAATGAATATGCACATAACTCTAAAGAAAAGAAAGAAATAGCAGGATTAGTTAGAGCTGAGGAAAGTAGGGATTTCTCATATGTTGTTGAGGTTTTAACAGAGGCGAGTATATTTAATAGGAACTTGCGTACAGACTTTTCTACATGGCACTCTTCACAATGTCCAATTAGTCCTTCTGTCTTTGAAAATCTGGAAAAGAAATTTGGCCAGCAACAGTTTTGGAGCAGATCTGAAAGGAAACTGCTATTTGATCGCATTAACATTGGCTTGATACAGATTCTTGAACCATGTTTATTTGTTCCAATATGGGAAAAGTCAACATTAAGAAGATTGAATGTTGAACTAAGCCAGAAGATTATTGAAGATGAGATGTGGGGGTTGCTTGTTGCACAAGAAAAGAAAGTGAGTAATGAGTTTGCAGACCATACACTTGAAGGGAAGATTAGATGGATAGAACTAGTTGAAGATGTTGAGGACATTGTTACAGAGATAGTTAATTTGGTAACAGAGGAGCTTGCTAAAGAGATAGTTTTCTCTGTGAATTTTTGA 636 0.3553 MNIPLLISDSSEVDDEECGLNVSSDEDCENEYAHNSKEKKEIAGLVRAEESRDFSYVVEVLTEASIFNRNLRTDFSTWHSSQCPISPSVFENLEKKFGQQQFWSRSERKLLFDRINIGLIQILEPCLFVPIWEKSTLRRLNVELSQKIIEDEMWGLLVAQEKKVSNEFADHTLEGKIRWIELVEDVEDIVTEIVNLVTEELAKEIVFSVNF 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01204 211 Pfam Domain of unknown function (DUF4378) 53 204 IPR025486 -
Vimu6g01204 211 PANTHER AFADIN 5 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01204 Vimu-Chr6 12209524 12210159 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01204 11 206 TRM (TON1 Recruiting Motif) Superfamily AT2G39435 34.518 7.04e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01204 - - vun:114185209 333.569