Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01146 ATGCCGAAATGGAAAAACTCAAGGCCCATATATGTTGGCCATTTTAGATCCTTTTGTTGTGGGCAAGAAATGGGGCACAAAGGTGCGGAAGAAGAAGAAATGGAGAACGTGGAATTCGAGGCATCGGAGATTGAGTACGTTAGCTATGGCGGCGAGCATCACCTCCCTCTGATAATGAACCTGGTGGACCAAGAGCTCAGCGAACCTTACTCCATCTTCACGTATCGTTACTTCGTCTATCTATGGCCTCAGCTTTCTTTCCTGGCGTTCCACAAGGGTAAATGCGTGGGCACGGTGGTATGTAAGATGGGGGAACACCGCAACACTTTCAGAGGCTACATTGCCATGCTGGTTGTCATCAAGCCTTATAGAGGAAGAGGCATTGGTACTACAGAGCTTGTTACTAGGTCTATCAAGGTGATGATGGAATCAGGTTGTGAAGAGGTTACACTGGAAGCGGAAGTGACAAATAAAGGAGCACTGGCACTGTATGGTCGCCTTGGCTTTATTAGAGCTAAACGGCTCTTTCACTACTATTTGAATGGTGTTGATGCTTTCCGTTTGAAACTTTTATTTCCCCGCTCGGAGTTGCACCCATCTCTTCCTTTGATGGCAGATAAATATGAGAGCCAAATGCAAAGTGACCAAGGTGATACACCATTTAAATAA 669 0.4589 MPKWKNSRPIYVGHFRSFCCGQEMGHKGAEEEEMENVEFEASEIEYVSYGGEHHLPLIMNLVDQELSEPYSIFTYRYFVYLWPQLSFLAFHKGKCVGTVVCKMGEHRNTFRGYIAMLVVIKPYRGRGIGTTELVTRSIKVMMESGCEEVTLEAEVTNKGALALYGRLGFIRAKRLFHYYLNGVDAFRLKLLFPRSELHPSLPLMADKYESQMQSDQGDTPFK 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01146 222 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 42 193 IPR000182 GO:0016747
Vimu6g01146 222 Gene3D - 51 219 - -
Vimu6g01146 222 CDD NAT_SF 86 152 - -
Vimu6g01146 222 FunFam N-alpha-acetyltransferase MAK3 isoform A 51 207 - -
Vimu6g01146 222 PANTHER N-ALPHA-ACETYLTRANSFERASE 30 28 196 IPR044542 GO:0004596|GO:0017196
Vimu6g01146 222 Pfam Acetyltransferase (GNAT) family 79 169 IPR000182 GO:0016747
Vimu6g01146 222 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 52 193 IPR016181 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vimu6g01146 Acetyltransf_1 6.7e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01146 K00670 - gmx:100806790 370.548