Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01140 ATGGATGCGCGTAGAGCTCCACGCGCCGTTATTGATCCTAAGGTGCGCAGAGTCGGGTTCTTTGCCCCGCCCGACCGCTCTCAATCGGGTCCACCACGTCCGATCTCACTTGATGTCTCTCCTGCAGTCAACTCCCTTTCTCCCGTCATGATCCCACTGCCGCGCCATTTGTCGGAGAATCTCAGCCTCCATGGCCGTCCCGCTCCGACTTCTCCATCCGTCGAGGAATCTGTCACTGCCGGGAGCTATTCTAGCTCCTCGGAGTTCTTTCCCCCTATGTCTCCAGCACCGTCCTCTTCCACGAATAGGATGGTTGACGGAGACTTCTTCGACAGCAGTAAGATGACATCTTCGTCTCCTCGCGGAGGGGTTGACTTGACCGCGACGAAGGCCAGTAGCGTCTTGGTCAGCCAATTAACCACAGTTGCAGTGGTGAATGCTGATTCCCTTGCAATTGGCGGTGAGGTTTTTGCTATTTTTGCTTTGTTCAGTTATTTGAATCGAGGAATTAATATGCTTAGAGTTCAAATTTTTTGTGAAAGTAAAATGAAATTGCAATTCAATATTTAA 570 0.507 MDARRAPRAVIDPKVRRVGFFAPPDRSQSGPPRPISLDVSPAVNSLSPVMIPLPRHLSENLSLHGRPAPTSPSVEESVTAGSYSSSSEFFPPMSPAPSSSTNRMVDGDFFDSSKMTSSSPRGGVDLTATKASSVLVSQLTTVAVVNADSLAIGGEVFAIFALFSYLNRGINMLRVQIFCESKMKLQFNI 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01140 189 MobiDBLite consensus disorder prediction 83 116 - -
Vimu6g01140 189 MobiDBLite consensus disorder prediction 20 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01140 Vimu-Chr6 11767855 11768424 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01140 1 145 Eukaryotic Initiation Factors Gene Family AT5G38640 39.873 4.48e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01140 K03680 - gmx:100785938 179.104