Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01139 ATGAATTTCGTGCCTTTATTTGATGTGTTGTTAGCCGAAGGAAATAAGGCATCTGGAACTCTGGCTTCAGTGAATGTAAAACCAGCTAAAGCTGCAAAGCCCCCACAAAAAGTTGATAATGCTTCAGTTGCAGCCTCTGAGAAGAAAGGGGTTGATCGTTCACAAGAAAAAGATAGAAAGAAAGATGTTCCTCAACCGCGGATGCAATATGATGATAAGAGCAGAGTGGAGAAAGCCAAAAGACGTGCTGTGGTAAAACAAACTGAAGCTAAGAACAGAGTTGAACTATTCAGGCATTTGCCACAGTATGAACATGGGAGTCAGCTACCAGATCTTGAGGCAAAGTTTTTCCACCTTGGCCCTATGCATCCTGCTGTCTATAAGGTAGCTTATGTTGTTGTACTGTTCTGTTTAATCCTGTTACAACTCATGTTTCTTATGTGA 444 0.4144 MNFVPLFDVLLAEGNKASGTLASVNVKPAKAAKPPQKVDNASVAASEKKGVDRSQEKDRKKDVPQPRMQYDDKSRVEKAKRRAVVKQTEAKNRVELFRHLPQYEHGSQLPDLEAKFFHLGPMHPAVYKVAYVVVLFCLILLQLMFLM 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01139 147 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 21 130 - -
Vimu6g01139 147 MobiDBLite consensus disorder prediction 49 84 - -
Vimu6g01139 147 MobiDBLite consensus disorder prediction 27 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01139 Vimu-Chr6 11765192 11767816 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01139 27 130 Eukaryotic Initiation Factors Gene Family AT5G38640 76.190 1.33e-44 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01139 K03680 - gmx:100785938 213.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01139 6 11765192 11767816 Vimu6g01139 6 11765192 11767816 ECH