Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01105 ATGGTTAATGGCACTACAACTCCTCATGGGAAGAGTCTGGACATCTTCGTCCTTACAGTGCTGCTATCTCATTTGATCAACAGGGTGTTGCATCCCCAGTTCAAATTGGTTGATTCCGATGGACTGATTGCGGCTCCAGGACTCTCTCGTTCAGCATTCAAGATGGTGGCGCTAATGCTTATTTGCAGGATGTCTGGGCCAACCTCATCGCCTCCATTATCGGCAAACATGGAAAACCCTCACCGGAAGGGGAATCATCCGCAAGGGCTCACCAACCCACTTCTCGGTGACGAATGCATCTCCACCGTCATCACCAAACCGAATGGCGTCTCCGGCGAGTTCAAGAAAATCAGTTCATCCACACAGAAATCCCCACAGTTGACGAACAGCCTAGACCCTAAATCGCAAAATCAAGAGGAGAAGGTTGGCCAAAAGTCTTTGCAATTTAAGGACTTGGATAAAGAAAAGAAAAATGTCAGCATTCAAGTTACAAGAGACGGTAGAAGGCAAAAGGTTTCAATTCATGATCTAGTGGTAGGAGACATGGTCCATCTTTCAATAGGAGACGTAGTTCCTGCAGATGGGTTATTGATATTTGGTTTTGGCTTATTAATAGACGAATCAAGTCTATCAGGTGAGAGTGACGCCGTAAATGTTGATAATCAGAAGCCTTTTCTTCTTGTTGGGACCACAGTGCAAGATGGGTTTGCAAAGATGTTGGTCACGTCCGTTGGTGTGAGGACGGAATGGGGAAGATTGATGGATACTCTGAACGAAGGAGGAGATGATGAGACACCGCTTCAGGTACTTCAGGAAGAGGATGTTCTGAAGAAATGCATGCAAGGCTAG 849 0.4617 MVNGTTTPHGKSLDIFVLTVLLSHLINRVLHPQFKLVDSDGLIAAPGLSRSAFKMVALMLICRMSGPTSSPPLSANMENPHRKGNHPQGLTNPLLGDECISTVITKPNGVSGEFKKISSSTQKSPQLTNSLDPKSQNQEEKVGQKSLQFKDLDKEKKNVSIQVTRDGRRQKVSIHDLVVGDMVHLSIGDVVPADGLLIFGFGLLIDESSLSGESDAVNVDNQKPFLLVGTTVQDGFAKMLVTSVGVRTEWGRLMDTLNEGGDDETPLQVLQEEDVLKKCMQG 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01105 282 PANTHER CATION TRANSPORTING ATPASE 144 269 - -
Vimu6g01105 282 MobiDBLite consensus disorder prediction 114 144 - -
Vimu6g01105 282 FunFam Calcium-transporting ATPase 133 258 - -
Vimu6g01105 282 Gene3D - 110 257 - -
Vimu6g01105 282 SUPERFAMILY Calcium ATPase, transduction domain A 160 256 IPR008250 -
Vimu6g01105 282 MobiDBLite consensus disorder prediction 69 92 - -
Vimu6g01105 282 Pfam E1-E2 ATPase 160 269 - -
Vimu6g01105 282 MobiDBLite consensus disorder prediction 114 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01105 Vimu-Chr6 11507737 11518726 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01105 144 269 Primary Pumps ATPases AT3G57330 73.810 9.51e-57 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01105 K01537 - gmx:100801260 214.927