Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01097 ATGGCGTTGCCTGCAACCTTGAAACAGTTGGGGATGGTGCCTGGCCTTATTGCTATCATCATCATGGCCTTTTTGACGGAGAAGTCAATTGAGCTTTTGATTAGGTTTACCCGAGCAGGGAAGTCTGTTTCTTATGCTGGTCTCATGGGGGATTCCTTTGGGAAGTATGGAAAAGCTCTGGCGCAGATATGTGTCATAATCAATAACATCGGCGTGCTGATTGTTTACATGATTATAATTGGTGATGTGCTCTCTGGAACATCTTCAGGTGGAGATCATCACTACGGTATTCTTGAAGGATGGTTTGGTGTGCAGTGGTGGACAGGACGGACATTTGTTGTTCTTATTACAACACTCGCCATATTTGCACCCCTTGCGAGTTTTAAACGAATTGGTGAGTGTTGTTCATTTATTTAA 417 0.4365 MALPATLKQLGMVPGLIAIIIMAFLTEKSIELLIRFTRAGKSVSYAGLMGDSFGKYGKALAQICVIINNIGVLIVYMIIIGDVLSGTSSGGDHHYGILEGWFGVQWWTGRTFVVLITTLAIFAPLASFKRIGECCSFI 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01097 138 PANTHER AMINO ACID TRANSPORTER 1 133 - -
Vimu6g01097 138 Pfam Transmembrane amino acid transporter protein 2 131 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01097 Vimu-Chr6 11456203 11456737 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01097 1 133 Amino Acid or Auxin Permease AAAP Family AT3G30390 63.158 1.51e-55 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01097 K14207 - vum:124822180 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01097 6 11456203 11456737 Vimu6g01097 6 11456203 11456737 ECH
Vimu8g00681 8 13575995 13580397 Vimu6g01097 6 11456203 11456737 PCT