Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01096 ATGCGAGGGGTTGTGCAAACTGCCCTTGTTCTATGCTCTTCTGTGTATGTAATGATAAGTTTCTTTGGTTTCCTCCTATTTGGAGAAGGAACTCTTGATGATGTGTTGGCCAATTTCGATACCAATCTTGGAATCCCTTTTGGTTCTGTGCTCAATGATGCTGTTCGTTTAAGCTACGCAGCTCACCTGATGCTTGTATTCCCAGTTGTTTTCTATCCATTGCGGCTCAATATAGATGGTCTCTTCTTCCCTTCATCAAGGCCTCTGGTTCTTGATAACTTGAGATTTGCATTTCTGACTATTTCCCTTATTGGTGTCATCTTTCTGGGAGCAAATTTCATACCCAGCATTTGGGATGCTTTCCAATTTACCGGAGCAACTGCCGCAGTCTGTATAGGATTCATTTTTCCAGCTGCCATCACTCTTAAGTAA 432 0.4236 MRGVVQTALVLCSSVYVMISFFGFLLFGEGTLDDVLANFDTNLGIPFGSVLNDAVRLSYAAHLMLVFPVVFYPLRLNIDGLFFPSSRPLVLDNLRFAFLTISLIGVIFLGANFIPSIWDAFQFTGATAAVCIGFIFPAAITLK 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01096 143 PANTHER AMINO ACID TRANSPORTER 2 140 - -
Vimu6g01096 143 Pfam Transmembrane amino acid transporter protein 1 143 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01096 Vimu-Chr6 11454923 11455354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01096 1 143 Amino Acid or Auxin Permease AAAP Family AT3G30390 78.322 4.42e-75 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01096 K14207 - gmx:100796345 262.692