Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu6g01048 | ATGTTTATGAAATGTCTAGGCAACACAAGTTCTTCAAAGAAACAGTATCAAACAGTAATAGAAGAATTGTGCCATCAGTTTTCTCTTGCAGAGATTAGAAAGTCAACCAACAACTTCGATAGAAAGAGACTAATTGGTCGTGGAGGATTTGGTGAAGTATATAAAGGATATCTCCAACATTATGCTGTTTCTAATTACATAGTAGCAGTGAAACGGTTTTCTGTGGAACACAGTGAAGTGTTCAAGAATGAAATAGAGTTGCTCTGCCAGCTTCGTCACCCTAATTGTGTCTCTCTTATAGGATTCTGCAACCACAAGAAAGAGAAGATTGTTGTGTACGAGTACATGTCAAATGAATCTCTAGATCGACACCTACAACGTGGGGAACTGTCATGGAAGCAAAGGTTGGAAATTTGCACAGGAGCAGCGCGTGGACTACACTACCTTCATGCAGGAGCTAAGCGCACCATCATCCACCGTATTGTCAAACCTCGAACCATCCTTTTGGACGACAACATGCACCCAAAACTCACAGGTTTCTGCATTAGCGTAAAGGGGTCACGATTGATGTCAAAACCGAAGCCAATTAAAGTTGATGTTGTGGCTGGTACTCCTGGATACATGGCTAGAGAGCTTTTCACCGACGATGCCATCACAGATAAATCTGATGTTTATTCTTTTGGTATGGTTCTGCTAGAGGTTGTGTGTGGAAGGAAATACATAAGAACGCCAGCTGAAAGAGAATTTCTGGAGAAGCCTGTTGAGGAAAAAGTTGATGCCAGCATCAAGGGAAAGATTGCACCAAAGTGTTGGGAAGTCTTCATAGATATTACCAAAAGATGCGTGATGTATGAACCAGATGAGCGACCAACAATGGGTGAAGTAGAGGTACAACTAGAGTATGCTTTGTCGTTGCAGGAACAAGCTGATATCATAAATACTAATGGTGATTATACCTTATTTTCCACCACAGTTATTCACCCAGGAGCGGAACTGATAGACAGCACAGAAGACAGTGATACTGAAGAAATGTTCCTCCAGTTTCTTCAAGCAGTCAAAGATCTGTCTCAAATTGGAACTATGTTTCTCAGTTGTTTGGGTATGTGCTGTTGGAAGCCCACATCGAATACAGACTCATCTCTGAGACAGTTTTCAACGGTGATACAAGAGCTGTGTCATCAATTTTCTCTCGCCGATCTAAGAAAAGCCACCAATAACTTCGATCTAAACAGAGTAATCGGAAATGGAATGTTCAGTGAAGTATATAAAGGCTATCTACAGCATAATGGTGCCTCTGATTACACGGTCGCAATAAAGCGATTTAACGATCAAGGATGGGAAGCGTTTAACAAGGAAATAGAATTGTTATGCCAGCTTCGTCACCCCAGATATAAACACCTGCAAGATGCTGAACTATCATGGAAGAAGAGGCTAGAGATATGTATAGGAGTAGCAAGTGGACTACACTACCTTCACACTGGAGCCAAGCGTTCTATCTTTCACTGTACACTCGGTCCTAGTAACATCCTTTTGGATGACCACATGGAGCCAAAACTCGCTGGTTTTGGTGTTAGCGTGCAGGGATCACGCTTTAAGTCAAAGCAGAAACAAGTCAATGTAGAGCATGCTATAGGTTCTTGGATCTACATGGCCACAGAGTATGTGATGGACGGTACCATCACAGATAAATGGGATGTTTTCTCCTTTGGTTTGGTTCTACTAGTAGTGGTGTGCAGGAGGACGTATTATTTAATAACCCTCTCTGAAAAAGAACTTCTGGAGAATCCTGTTGAGGAGAAAATTGATCCTATTATCAAAGGAAAGATTGCACCAGATTGTTGGCAAGTGTTTGTAGATGTCATGATGAATTGCTTGAAGTATGAAGCAGATGAGCGACCTACAATGGGTGAAATAGAGGCCCCAGTCTTTGAACTAGAGCAAACAGTATCTGAGATGAATGCTTGGAAAGCCACCGATAACTTTGATTTAAACAGAGTAATAGGACGTGGATTATTTAGTGAAGTATATAAAGGCTGTTTACAGCATAATGGTGCTTCTGATTACAAGGTCGCGATAAAGCGATTTAATGATCAAGGATGGGAAGCGTTCAACAAGGAAATAGAATTGTTATGTCAGCTTCATCACCCCAGATGTGTGTCTCTTATAGGATTCTGCAACCACGAAAATGAGAAGATTCTTGTATACGAGTTCATGTCCAATGGATCTCTAAAGGAACAACTACAAGATGGTAAACTATCATGGAAGAAGAGGCTAGAAATATGCATAGGAGTAGCACGTGGACTGCACTACATTCACACCGGAGCTAAACGTACCATCTTTCACTGCATCCTAAGTCCTGGTACCATCCTTTTGGATGACCACATGGAGCCAAAACTCTCTGGTTTCGGTGTTAGCCTGCAGGGATCACGTTTTATGTCAAAGCAGAAGCAAATCAGTGTAGAGCATGTTATGGGTACTTGGGGCTTCATGGCTACGCAGTTTGTCAGGGATGGTACCATCACAGCTAAATGGGATGTTTTCATATTTGGTTTGGTTCTACTCGATGTTGTGTGCAGGAGGATGTCAATAACCCTGGCTGAAAAAGAATTTCTGGAGAATCCTATTGAGGAGAAAATTCATCCGATTCTCAAAGGAAAGATTGCTCCAGATTGTTGGCAAGTCTTTGGTGACGTCGTGGTAAATTGCTTGAAGTATGAACCAGATGAGCGACCTACAATGGGTGAAGTAGAGGTGCAACTTGAGCACGCTCTATCGATGCAGGAACGAGCAGATATCACAAACTCCAACTGTGATTATACCTTATTGTCCAAAACCATTATTCCCCTCGGAAACAGTACGTGA | 2862 | 0.4193 | MFMKCLGNTSSSKKQYQTVIEELCHQFSLAEIRKSTNNFDRKRLIGRGGFGEVYKGYLQHYAVSNYIVAVKRFSVEHSEVFKNEIELLCQLRHPNCVSLIGFCNHKKEKIVVYEYMSNESLDRHLQRGELSWKQRLEICTGAARGLHYLHAGAKRTIIHRIVKPRTILLDDNMHPKLTGFCISVKGSRLMSKPKPIKVDVVAGTPGYMARELFTDDAITDKSDVYSFGMVLLEVVCGRKYIRTPAEREFLEKPVEEKVDASIKGKIAPKCWEVFIDITKRCVMYEPDERPTMGEVEVQLEYALSLQEQADIINTNGDYTLFSTTVIHPGAELIDSTEDSDTEEMFLQFLQAVKDLSQIGTMFLSCLGMCCWKPTSNTDSSLRQFSTVIQELCHQFSLADLRKATNNFDLNRVIGNGMFSEVYKGYLQHNGASDYTVAIKRFNDQGWEAFNKEIELLCQLRHPRYKHLQDAELSWKKRLEICIGVASGLHYLHTGAKRSIFHCTLGPSNILLDDHMEPKLAGFGVSVQGSRFKSKQKQVNVEHAIGSWIYMATEYVMDGTITDKWDVFSFGLVLLVVVCRRTYYLITLSEKELLENPVEEKIDPIIKGKIAPDCWQVFVDVMMNCLKYEADERPTMGEIEAPVFELEQTVSEMNAWKATDNFDLNRVIGRGLFSEVYKGCLQHNGASDYKVAIKRFNDQGWEAFNKEIELLCQLHHPRCVSLIGFCNHENEKILVYEFMSNGSLKEQLQDGKLSWKKRLEICIGVARGLHYIHTGAKRTIFHCILSPGTILLDDHMEPKLSGFGVSLQGSRFMSKQKQISVEHVMGTWGFMATQFVRDGTITAKWDVFIFGLVLLDVVCRRMSITLAEKEFLENPIEEKIHPILKGKIAPDCWQVFGDVVVNCLKYEPDERPTMGEVEVQLEHALSMQERADITNSNCDYTLLSKTIIPLGNST | 953 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu6g01048 | 953 | SUPERFAMILY | Protein kinase-like (PK-like) | 12 | 299 | IPR011009 | - | |
Vimu6g01048 | 953 | Pfam | Protein tyrosine and serine/threonine kinase | 42 | 298 | IPR001245 | GO:0004672|GO:0006468 | |
Vimu6g01048 | 953 | Pfam | Protein tyrosine and serine/threonine kinase | 469 | 639 | IPR001245 | GO:0004672|GO:0006468 | |
Vimu6g01048 | 953 | Pfam | Protein tyrosine and serine/threonine kinase | 663 | 919 | IPR001245 | GO:0004672|GO:0006468 | |
Vimu6g01048 | 953 | Pfam | Protein tyrosine and serine/threonine kinase | 409 | 463 | IPR001245 | GO:0004672|GO:0006468 | |
Vimu6g01048 | 953 | Gene3D | Phosphorylase Kinase; domain 1 | 370 | 463 | - | - | |
Vimu6g01048 | 953 | Gene3D | Phosphorylase Kinase; domain 1 | 3 | 115 | - | - | |
Vimu6g01048 | 953 | ProSiteProfiles | Protein kinase domain profile. | 407 | 643 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu6g01048 | 953 | SUPERFAMILY | Protein kinase-like (PK-like) | 650 | 920 | IPR011009 | - | |
Vimu6g01048 | 953 | SUPERFAMILY | Protein kinase-like (PK-like) | 387 | 640 | IPR011009 | - | |
Vimu6g01048 | 953 | FunFam | Receptor-like protein kinase ANXUR2 | 738 | 942 | - | - | |
Vimu6g01048 | 953 | PANTHER | OS07G0166700 PROTEIN | 392 | 462 | IPR045272 | GO:0004714|GO:0006468 | |
Vimu6g01048 | 953 | ProSitePatterns | Protein kinases ATP-binding region signature. | 45 | 71 | IPR017441 | GO:0005524 | |
Vimu6g01048 | 953 | ProSiteProfiles | Protein kinase domain profile. | 661 | 925 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu6g01048 | 953 | Gene3D | Phosphorylase Kinase; domain 1 | 667 | 738 | - | - | |
Vimu6g01048 | 953 | FunFam | Receptor-like protein kinase ANXUR2 | 116 | 321 | - | - | |
Vimu6g01048 | 953 | ProSitePatterns | Protein kinases ATP-binding region signature. | 667 | 693 | IPR017441 | GO:0005524 | |
Vimu6g01048 | 953 | ProSiteProfiles | Protein kinase domain profile. | 39 | 302 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu6g01048 | 953 | ProSitePatterns | Protein kinases ATP-binding region signature. | 413 | 439 | IPR017441 | GO:0005524 | |
Vimu6g01048 | 953 | FunFam | Receptor-like protein kinase ANXUR2 | 5 | 115 | - | - | |
Vimu6g01048 | 953 | Gene3D | Transferase(Phosphotransferase) domain 1 | 464 | 665 | - | - | |
Vimu6g01048 | 953 | Gene3D | Transferase(Phosphotransferase) domain 1 | 116 | 320 | - | - | |
Vimu6g01048 | 953 | Gene3D | Transferase(Phosphotransferase) domain 1 | 739 | 943 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu6g01048 | Vimu-Chr6 | 11149480 | 11156735 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu6g01048 | 657 | 931 | Receptor kinase-like Gene Family | AT3G51550 | 40.956 | 4.59e-57 | 210 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CrRLK1L-1 | Vimu6g01048 | PK_Tyr_Ser-Thr | 3.7e-34 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu6g01048 | - | - | adu:107486597 | 506.523 |