Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01045 ATGCCACTAGACCATAGAGTGGCGGTTTTTTTCTATGTAGCTATTCTTGTTATATGCAAATGCAGGCTGTTGCTATCTTCAAGTCTCTTCTTGAAGGCACCAATGGCTTTGTTCATGGCAATTCTTGGCGTTGTTGTGTTGTGGAATGGAGTCAGATACAGGAGGAAAGGCTTGCCTCCTGGCGCAATGGGTTGGCCGGTTTTTGGGGAGACAACTGAGTTTCTTAAGCAAGGTCCAAACTTCATGAAGAACAAGAGGGCAAGTGGTTTAAGAGATGCCGATGAACGTTGTTTCAGAGTAAAATCAGTGAACTACTACTTGCGTTGTAGTTCTGGGAGTGAAGAGAAGAGGAAAGTAGGGTATGGCAGTTTTTTCAAATCTCACATTCTGGGATGTCCTACCATTGTATCCATGGATCCGGAGCTGAACAGATTCATACTGATGAATGAAGCAAAAGGGCTTGTTCCTGGGTACCCACAATCCATGTTAGATATCTTAGGCACACGCAATATTGCAGCTGTTCATGGCTCCACTCACAAGTACATGAGAGGGGCACTGCTTTCAATTATTAGCCCCACCTTGATCAGGGATCAGCTTTTACCAAAAATTGATGAGTTCATGAGAACCCACTTGATTGATTGGGATAACAAAGTCATAAACATCCAGGAGAAAACTAAAGAGGAAAAGTTATCAGAATTTTTTCAAGTACTGATCCTCAAATATTTGGAACAGATGGCTTTTCTCTCTTCCCTGAAGCAGATTGCTGGTATGGAATCCAGCTCAATAGCTCAACCCTTCATGACAGAGTTCTTCAAACTAGTTCTGGGAACACTCTCTTTGCCTATTAACCTTCCTGGCACAAATTATCGCGGTGGATTGCAGGCAAGGAAAAGTATTATCAGCATTCTGAGTCAGTTGCTGAAGGAAAGGATAGCATCCCAAGAATCCCACGTGGACATGCTGGGTTGCTTGATGAATAGAGATGAAAACCGATACAAACTAACTGATGAGGAAATCATTGATTTAGTTATTACTATTATGTATTCTGGTTACGAAACTGTTTCAACCACATCGATGATGGCAGTGAAGTATCTCCATGACCATCCCAAAGTTCTTGAAGAAATCAGAAAAGAGCATTTTGCCATAAGGGAAAGGAAAAAGCCAGAGGATCCAATTGACTGTAATGATCTCAAGTCAATGAGGTTTACTCGTGCGGTGATTTTCGAGACCTCGAGATTAGCAACAATAGTTAACGGGGTTCTAAGAAAAACAACTCACGACATGGAACTAAACGGGTATCTGATTCCTAAAGGGTGGAGGATATATGTATACACGAGAGAGATCAATTATGATCCATTTCTGTATCATGATCCAATGACCTTCAATCCATGGAGATGGCTGGGTAACAGTCTGGAGTCACAAAGCCACTTCTTGATTTTTGGAGGGGGTACCAGACAATGTCCAGGGAAGGAGTTAGGGATAGCAGAAATTTCTACTTTCTTGCACTACTTTGTAACAAGATACAGGTGGGAAGAAGTAGGAGGAGATAAACTGATGAAGTTTCCTAGAGTTGTGGCACCAAATGGACTGCACATAAGGGTCTCATCTTTTACTAGCTAG 1620 0.4204 MPLDHRVAVFFYVAILVICKCRLLLSSSLFLKAPMALFMAILGVVVLWNGVRYRRKGLPPGAMGWPVFGETTEFLKQGPNFMKNKRASGLRDADERCFRVKSVNYYLRCSSGSEEKRKVGYGSFFKSHILGCPTIVSMDPELNRFILMNEAKGLVPGYPQSMLDILGTRNIAAVHGSTHKYMRGALLSIISPTLIRDQLLPKIDEFMRTHLIDWDNKVINIQEKTKEEKLSEFFQVLILKYLEQMAFLSSLKQIAGMESSSIAQPFMTEFFKLVLGTLSLPINLPGTNYRGGLQARKSIISILSQLLKERIASQESHVDMLGCLMNRDENRYKLTDEEIIDLVITIMYSGYETVSTTSMMAVKYLHDHPKVLEEIRKEHFAIRERKKPEDPIDCNDLKSMRFTRAVIFETSRLATIVNGVLRKTTHDMELNGYLIPKGWRIYVYTREINYDPFLYHDPMTFNPWRWLGNSLESQSHFLIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEVGGDKLMKFPRVVAPNGLHIRVSSFTS 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01045 539 Pfam Cytochrome P450 121 523 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01045 539 CDD CYP90-like 121 535 - -
Vimu6g01045 539 Gene3D Cytochrome P450 50 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01045 539 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 480 489 IPR017972 GO:0005506|GO:0016705
Vimu6g01045 539 PRINTS P450 superfamily signature 349 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01045 539 PRINTS P450 superfamily signature 487 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01045 539 PRINTS P450 superfamily signature 405 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01045 539 PRINTS P450 superfamily signature 478 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01045 539 FunFam Cytochrome P450 85A1 101 536 - -
Vimu6g01045 539 PRINTS E-class P450 group I signature 118 137 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01045 539 PRINTS E-class P450 group I signature 444 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01045 539 PRINTS E-class P450 group I signature 338 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01045 539 PRINTS E-class P450 group I signature 487 510 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01045 539 PRINTS E-class P450 group I signature 477 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01045 539 PRINTS E-class P450 group I signature 358 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01045 539 PRINTS E-class P450 group I signature 404 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01045 539 SUPERFAMILY Cytochrome P450 52 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g01045 539 PANTHER CYTOCHROME P450 26 56 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01045 Vimu-Chr6 11117941 11121641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01045 138 537 Cytochrome P450 AT5G38970 66.085 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01045 K09590 - gmx:100785414 846.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01045 6 11117941 11121641 Vimu6g01045 6 11117941 11121641 ECH
Vimu8g00719 8 14068728 14072771 Vimu6g01045 6 11117941 11121641 PCT