Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01040 ATGGCAGGTACACCACATTTGACCTCATTTGTTTCTGGCTTCGGGAAGAACGAATTTTCACCTACGGTTCAATGTACCAATCACATGTGTCCAATCAGAGTTCACTGGCATGTTAAGCTTAACTCCGAGAAGTACTGGCATGTGAAGATTACTATTACTAATTTGAATTACAGGATGAATTATTCTGACTGGAACTTAGCCATTCAACACCCAAACTTTGACCATCGGACTCAAGTGTCCGGTTTCACCTACAAGCTAATGACTCCTTATGCTTCAATAAGTAAGTGTGAAATGATCCTAAATTGTTTGTTTCAAAATTCTGGAGCAAGAAATTTTCTGAAATGCTGCTAA 351 0.3875 MAGTPHLTSFVSGFGKNEFSPTVQCTNHMCPIRVHWHVKLNSEKYWHVKITITNLNYRMNYSDWNLAIQHPNFDHRTQVSGFTYKLMTPYASISKCEMILNCLFQNSGARNFLKCC 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01040 116 PANTHER PROTEIN COBRA 17 106 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01040 Vimu-Chr6 11090443 11091032 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01040 5 107 COBRA Gene Family AT3G02210 54.808 1.09e-36 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01040 - - gmx:100783820 156.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01040 6 11090443 11091032 Vimu6g01040 6 11090443 11091032 ECH
Vimu8g00723 8 14102595 14107169 Vimu6g01040 6 11090443 11091032 PCT