Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01039 ATGAACAACTTCCAAAGATATCGTCCTATTACTTCACCTGGCTGGTATCTAGGGTGGACATGGGCAAAAAAAGAGGTAATATGGAGCATGATGGGAGCGCAGACCACTGAACAAGGAGATTGTTCAAAATTTAAGGGAGGTGTTCCACATTCTTGTATGAAAAATCCAACAGTTGTAGATTTGCTTCCTGGAACACCTTACAATCAACAAATTGCAAATTGTTGCAAAGGTGGTCTGCTTAGTTCATGGGTGCAGGATCCAAGCAGAGCAGCAGCATCTTTTCAAGTTAGTGTTGGTGGAGCTGGAAGCACAACCAGAACTGTCAAACTCCCAACAAACTTCACCTTGGAAGCACCTGGACCACGTTATACTTGTGCACAAGCTAAGATTGTCAGACCCACTAAATTCATTACTCCAGACAAAAGGAGAGTGACCCAAGCATTGAGTAAGTTTTAG 456 0.4298 MNNFQRYRPITSPGWYLGWTWAKKEVIWSMMGAQTTEQGDCSKFKGGVPHSCMKNPTVVDLLPGTPYNQQIANCCKGGLLSSWVQDPSRAAASFQVSVGGAGSTTRTVKLPTNFTLEAPGPRYTCAQAKIVRPTKFITPDKRRVTQALSKF 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01039 151 Pfam COBRA-like protein 1 150 IPR006918 GO:0010215|GO:0016020
Vimu6g01039 151 PANTHER PROTEIN COBRA 1 149 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01039 Vimu-Chr6 11089716 11090171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01039 1 148 COBRA Gene Family AT5G60920 75.000 8.18e-81 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01039 - - gmx:100782876 266.929