Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01032 ATGTTTCTCAAATGTCTGGGCTTCAGCTGTTCCAAGAACACATCTCAGAGAAATTATCCAACAATTATAGAAGAGTTGTGCCATAAATTTTCTCTCTCCCATCTTACCAAATCAACCAACAACTTTGATCCAAAAAGGGTAGTTGGCCATGGACCATGTTCCGAAGTATATGAAGCTTCTCTCCAACGCGGTGACGGCTCTCCTTATACAGTCGCAATAAAGAGATTTATTAGTCTAAAAGACAGTGACATCTTTAAGAATGAAATAGAGTTGCTTTGCCAGCTTCGTCACCCTAATATCGTCTCTCTTGTAGGATTCTGCAACCACAAGAAAGAGAAGATTATTGTGTACGAATACCTGTCCAATGAATCTCTTTATCAACACATACAAAGTGGGAAACTGTCATGGAAGAAAAGGCTGGAGATCTGCATAGGAGCAGCACGTGGACTGCACTATCTTCATGCTGGAGCAAAGCGCACCATCATTCATCGTAATATCAATCCTAGCAACATTCTTTTCGATGGGAACATGGAGCCAAAGCTTGCAGCTTTTGGCCTTAGCGTACAGGGACAGCGTTTTATGTCAAAGCCAAAGCCAATTAAAGTAAATTCTCCTGCGGGTACTATTGGCTACATCGCTGCGGAGCAAATTGAGAACCTGACCATCACAGATAAAACCGATGTTTATTCATTTGGTATGGTTCTATTAGAAGTTGTGAGTGGAAAGAAATATATGAATTTAATACAAGAAGAGGAAGTTTTTGAAAGGCCATTTGAAGAGAAAGTTGATCCGAAAATCAAAGGAAAGATTACACCTGAGTCTTGGCAAGTCTTTATAGATATCATGCAAGGATGCTTGAAATACGAAGTAGATGAGCGACCGACAATGGGTGAGGTAGAGGTGGAACTTGAGCATGCTCTGTCGTTGCAGGAACAAGCAGATATCACAAACATCCATGGTCATTATGTTTTATTGTCTAAAACCATTATTAACTTAAAGCCTGAGTTAGAAGATGAAGATATCGGTATAACAGAAGACAGTGATTCAGAAGACATGTTTCATAGGCAATTGTGA 1074 0.3994 MFLKCLGFSCSKNTSQRNYPTIIEELCHKFSLSHLTKSTNNFDPKRVVGHGPCSEVYEASLQRGDGSPYTVAIKRFISLKDSDIFKNEIELLCQLRHPNIVSLVGFCNHKKEKIIVYEYLSNESLYQHIQSGKLSWKKRLEICIGAARGLHYLHAGAKRTIIHRNINPSNILFDGNMEPKLAAFGLSVQGQRFMSKPKPIKVNSPAGTIGYIAAEQIENLTITDKTDVYSFGMVLLEVVSGKKYMNLIQEEEVFERPFEEKVDPKIKGKITPESWQVFIDIMQGCLKYEVDERPTMGEVEVELEHALSLQEQADITNIHGHYVLLSKTIINLKPELEDEDIGITEDSDSEDMFHRQL 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01032 357 FunFam Receptor-like protein kinase ANXUR2 120 325 - -
Vimu6g01032 357 ProSiteProfiles Protein kinase domain profile. 42 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu6g01032 357 PANTHER OS07G0166700 PROTEIN 27 310 IPR045272 GO:0004714|GO:0006468
Vimu6g01032 357 FunFam Receptor-like protein kinase ANXUR2 7 119 - -
Vimu6g01032 357 Gene3D Phosphorylase Kinase; domain 1 6 119 - -
Vimu6g01032 357 Pfam Protein tyrosine and serine/threonine kinase 45 301 IPR001245 GO:0004672|GO:0006468
Vimu6g01032 357 Gene3D Transferase(Phosphotransferase) domain 1 120 324 - -
Vimu6g01032 357 SUPERFAMILY Protein kinase-like (PK-like) 16 302 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01032 Vimu-Chr6 11042046 11043499 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01032 9 314 Receptor kinase-like Gene Family AT3G51550 39.441 4.75e-65 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Vimu6g01032 PK_Tyr_Ser-Thr 1.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01032 - - vum:124832507 497.664