Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01031 ATGTTTCTCAAATGTGTGAGATTCAACCGTTCATCTCAGAGAAAGTATGCAATGATAATAGAAGAGCTATGCTGTCAATTTTCTCTCGCCGATCTTAGGAAATCAACCAACAATTTCGACGATAGACACACAATAGACTCTCATGCTGGAGTATACAAAGGTATTCTTGAACATAATGGCATCAATGATTATGATGTTGCATTAAGGCAGATATATGGGACACAAAACCGAAGATTCCTTGAGTTCAAGAAGGAAATTGAGTTGTTATGTCAGCTTCATCATCCTAATCTGATCTCTCTTATAGGATTCTACGAGGGAAAAAATGAGAGTATTCTTGTATACGAATACATGTCTAATGGATCTCTAGATCGACAACTTGAAAGAGGGGAACTTTCGTGGAAGAAAATGGGTGAGAATGTAAGGAGGGGAAACACTGAGTGTGAAAGTGCAAACAATGTTGTAAGAGTGTGA 471 0.3779 MFLKCVRFNRSSQRKYAMIIEELCCQFSLADLRKSTNNFDDRHTIDSHAGVYKGILEHNGINDYDVALRQIYGTQNRRFLEFKKEIELLCQLHHPNLISLIGFYEGKNESILVYEYMSNGSLDRQLERGELSWKKMGENVRRGNTECESANNVVRV 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01031 156 Gene3D Phosphorylase Kinase; domain 1 3 116 - -
Vimu6g01031 156 SUPERFAMILY Protein kinase-like (PK-like) 16 134 IPR011009 -
Vimu6g01031 156 FunFam Receptor-like protein kinase ANXUR2 5 116 - -
Vimu6g01031 156 PANTHER OS07G0166700 PROTEIN 24 135 IPR045272 GO:0004714|GO:0006468
Vimu6g01031 156 Pfam Protein tyrosine and serine/threonine kinase 49 129 IPR001245 GO:0004672|GO:0006468
Vimu6g01031 156 ProSiteProfiles Protein kinase domain profile. 37 156 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01031 Vimu-Chr6 11037863 11038618 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01031 27 135 Receptor kinase-like Gene Family AT1G79620 42.105 1.00e-18 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Vimu6g01031 PK_Tyr_Ser-Thr 5.7e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01031 - - vum:124832507 219.55