Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu6g01014 | ATGTTTAACGGTTCTCTCAATGATCACCTTCATCATACAAACAATCACAAATTTGTTCCACTTTCGTGGGAAAGGAGGCTTCGAATTTGCATAGGTGTTGCACGTGGATTGCACTATCTACACACAGGAGGCAGGTGTTCTGTGATACACAATTTTTTCAAAACACAGTACATCCTTTTGGATCAAAACTGGGAGCCTAAAATTTCTGGTTTACTGTTGTCCAAAAGGGGAGCCGTCGATGTTGCAAGTTCATCTCTTGTTGCGAGAAACCATGATACTTTCGCATATTGTGATCCTGAGTATGCAGCCTCTGGCATCTTTACTGTGAAATCAAATGTGTTTTCATTTGGTGTGGTTCTATTGGAAGTTGTGAGTGGTGTGAAGAACCCTAATTATTCAGTGGAGTTACATGCAGAAAAAATAGTTGATCCGTTTATTAAGTCCAAAATCGCTCCAGATTGTTGGAAAACGTTCATTGATATCACTGAGAGGTGCTTGCATAAACAAGGAACGGAACTACCAAACATGGGCGAAGTGGAGATACAGCTTGAGCTTGCGCTTCAATTGCAGCAGAAATCTCAAACCTATGTTGACTGCAATCTTGATTTTGTCCAAACTGTTTAA | 624 | 0.4038 | MFNGSLNDHLHHTNNHKFVPLSWERRLRICIGVARGLHYLHTGGRCSVIHNFFKTQYILLDQNWEPKISGLLLSKRGAVDVASSSLVARNHDTFAYCDPEYAASGIFTVKSNVFSFGVVLLEVVSGVKNPNYSVELHAEKIVDPFIKSKIAPDCWKTFIDITERCLHKQGTELPNMGEVEIQLELALQLQQKSQTYVDCNLDFVQTV | 207 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu6g01014 | 207 | SUPERFAMILY | Protein kinase-like (PK-like) | 3 | 190 | IPR011009 | - | |
Vimu6g01014 | 207 | ProSiteProfiles | Protein kinase domain profile. | 1 | 197 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu6g01014 | 207 | Gene3D | Transferase(Phosphotransferase) domain 1 | 2 | 199 | - | - | |
Vimu6g01014 | 207 | SMART | tyrkin_6 | 1 | 183 | IPR020635 | GO:0004713|GO:0006468 | |
Vimu6g01014 | 207 | Pfam | Protein tyrosine and serine/threonine kinase | 2 | 180 | IPR001245 | GO:0004672|GO:0006468 | |
Vimu6g01014 | 207 | PANTHER | OS07G0166700 PROTEIN | 1 | 190 | IPR045272 | GO:0004714|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu6g01014 | Vimu-Chr6 | 10905282 | 10905935 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu6g01014 | 1 | 194 | Receptor kinase-like Gene Family | AT3G51550 | 41.706 | 1.23e-44 | 156 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CrRLK1L-1 | Vimu6g01014 | PK_Tyr_Ser-Thr | 7.5e-18 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu6g01014 | - | - | pvu:PHAVU_008G031100g | 337.421 |