Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00991 TTGAATCTTTATATAAAGGGCGAGAAAGTCCGAAACACCACACAAAATACAGATTTACATCAAATTATGGCTTCAAATAATGTCCTAAAAGCGAGTGAGATATTTGAAGGTCAAGTTCACTTGTACAAACACTTGTATGCTCATGCAGTAGATTGTATGAGTATTAAATGGATGATTGAGCTTGGCATACCAGACATCATCCACAACCATTGTCAACCCATTTCACTTCCAAAGTTGGTGTCCATTCTACAAATTCCACCAAGTAAAGTTAGAGGAGTGAAGAGTCTCCTACGCTACCTGGCACACAATGGATTCCTTCAGATTGTAAGAGTCCATCACAGCACAGAAGAAAACGAAGCATTTTCTCTAACACCTGCATCACACCTTCTTGTCAAAGGCACTGACCTTTGTCTTGCACCAATGGTAGAGGCTTTTATTAACCCAAGTATGGCACATACGTGGTCTCACTTGAAGAAGTGGACTTATGAGGATGATCTTACACTGTATGATGTCTCCCTTGGATCAAATTTCTGGGACTTTCTTAGTAAAAACCCAGCAATGAACGAGTCGTTCAATGAGGCAATGGCTAGCGATTCTCAGATGATAAACCTAGCACTAAGAGGTTGCAAATGGGTGTTCGAAGGAGTGGAGACCATTGTAGATGTCGGAGGTGGAACCGGAACCACAGCCAAGGCTATCTGTGATGCATTTCCTAACGTGAAGTGCACTGTGTTTGACCGTCCACAGGTTGTGGAGAAGTTGTCGGGAACCAAGAATTTGACATATGTTGGCGGTGACATGTTCGAATCTATTCCCAAGGCTGATGCAGTTCTACTCAAGTGGATTTTGCATGATTGGAATGACGAAGATTGTAAGAAGATATTAGAAAATTGCAAAGAAGCTATTTCTGGTAAAGGAGAAAGAGGAAAAGTAATTGTGATAGAAGCTGTGATAAACGAAGGCCAAGATGAACAGGGACTTACCGGAGTAAAGCTACTCATGGATGTGCAAATGACATGTCTTAATAATGGAAAAGAGAGAACTGAAGAAGAATGGAAGAAACTCGTGGTGGAAGCAGGATTTCAGAGCTACAAAATATCTTCTTTCACAAGATGTTTGTCTCTTATTCAGATCTATCCTTGA 1143 0.4094 MNLYIKGEKVRNTTQNTDLHQIMASNNVLKASEIFEGQVHLYKHLYAHAVDCMSIKWMIELGIPDIIHNHCQPISLPKLVSILQIPPSKVRGVKSLLRYLAHNGFLQIVRVHHSTEENEAFSLTPASHLLVKGTDLCLAPMVEAFINPSMAHTWSHLKKWTYEDDLTLYDVSLGSNFWDFLSKNPAMNESFNEAMASDSQMINLALRGCKWVFEGVETIVDVGGGTGTTAKAICDAFPNVKCTVFDRPQVVEKLSGTKNLTYVGGDMFESIPKADAVLLKWILHDWNDEDCKKILENCKEAISGKGERGKVIVIEAVINEGQDEQGLTGVKLLMDVQMTCLNNGKERTEEEWKKLVVEAGFQSYKISSFTRCLSLIQIYP 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00991 380 FunFam O-methyltransferase ZRP4 132 380 - -
Vimu6g00991 380 PANTHER O-METHYLTRANSFERASE 41 365 IPR016461 GO:0008168
Vimu6g00991 380 PIRSF O-mtase 19 380 IPR016461 GO:0008168
Vimu6g00991 380 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 43 380 IPR016461 GO:0008168
Vimu6g00991 380 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 137 373 IPR029063 -
Vimu6g00991 380 Gene3D - 22 130 IPR036388 -
Vimu6g00991 380 SUPERFAMILY "Winged helix" DNA-binding domain 32 134 IPR036390 -
Vimu6g00991 380 CDD AdoMet_MTases 218 318 - -
Vimu6g00991 380 Gene3D Vaccinia Virus protein VP39 131 380 IPR029063 -
Vimu6g00991 380 Pfam Dimerisation domain 53 101 IPR012967 GO:0046983
Vimu6g00991 380 Pfam O-methyltransferase domain 154 362 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00991 Vimu-Chr6 10683548 10684836 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00991 44 378 Monolignol Biosynthesis Gene Families AT5G54160 31.268 3.29e-46 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00991 K22588 - gmx:100811609 492.656