Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00989 ATGAGGTATTGGATTTTGCATGATTGGAATGACAAGGAGTGTAAGAATATATTAGAAAATTGCAAAGAATCTATTTCTGGTCAAGGAGAAAGTGGAAAAGTAATTGTGATAGAATCTATGATAAACGAAGGCCAAGATGAGCAGGGAGTTACTGGACTAAAGCTGGCCTCGGATGTGAAAATGACATGTCTTCTTAATGGAAAAGAAAGAAGAGAAGAAGAATGGAAGAAACTGTTCATGGAAGCAGGGTTCCAAAGCTACAAAATATCTCCTTTCACAGGATGTTTGTCTCTTATTCAAATCTATCCTTGA 312 0.3654 MRYWILHDWNDKECKNILENCKESISGQGESGKVIVIESMINEGQDEQGVTGLKLASDVKMTCLLNGKERREEEWKKLFMEAGFQSYKISPFTGCLSLIQIYP 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00989 103 Pfam O-methyltransferase domain 4 85 IPR001077 GO:0008171
Vimu6g00989 103 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 4 99 IPR029063 -
Vimu6g00989 103 Gene3D Vaccinia Virus protein VP39 2 103 IPR029063 -
Vimu6g00989 103 PANTHER O-METHYLTRANSFERASE 4 88 IPR016461 GO:0008168
Vimu6g00989 103 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 103 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00989 Vimu-Chr6 10668142 10668482 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00989 4 103 Monolignol Biosynthesis Gene Families AT1G51990 40.196 1.91e-16 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00989 - K22588 gmx:100776621 155.606