Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00987 ATGACTAGAAGTCCTACTAGTGCCAACTTGCTGCCAGAGAATGAACTGAAATCACCAATTGTTGTCCAAGCAAGTGTTGCAGAGAACGGTAGCAAAAATGGTAGTAAGAATGCTGCTGTAGTGGCTATGAGAAGTGAATCTAACAAGCATTCATTACCCCATAACAAAACCAAAGACATTGTGAGGAACTTGTTGGAAGACATGCCCTGTGTCTCCACAAAAGGTGATGGTCCTAATGGAAGAAGAGTAGAAGGTTTTCTTTACCGGTATGGGAAAGGAGAGGAAGTGAGAATAGTGTGTGTTTGCCATGGCAGTTTTCTCACCCCTTCAGAGTTTGTTAAGCATGCTGGTGGTGGTGACGTCGCAAACCCATTGAAGCATATTGTTGTTAGTCCAAGCATTGTGTGA 408 0.4338 MTRSPTSANLLPENELKSPIVVQASVAENGSKNGSKNAAVVAMRSESNKHSLPHNKTKDIVRNLLEDMPCVSTKGDGPNGRRVEGFLYRYGKGEEVRIVCVCHGSFLTPSEFVKHAGGGDVANPLKHIVVSPSIV 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00987 135 PANTHER AFP HOMOLOG 2 3 133 IPR031307 GO:0007165
Vimu6g00987 135 Pfam Tify domain binding domain 96 130 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00987 Vimu-Chr6 10647622 10648118 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00987 - - vun:114185130 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00987 6 10647622 10648118 Vimu6g00987 6 10647622 10648118 ECH