Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00934 ATGGATGCAGGCATGGACATGTTTTTGAAAAATTATAAATTTGAAAAAACAGATGGCTTTGTATCCATGTTGGGCAAGATAAAAATTGCAGAACATGTATTGACTGGGGAGAAGGTCATCATCCAGATCCTTAAACGTGCCAAGAAAAACAACATGAAAATAGAAGAACAAGTGAAATTAGAACTTGAAGTTTTAAAATTGCTGAATCATCCTCGCATTATAAAACTCCATGACGTGATAGAAACTCCAACTGACACATGTTTTGTTATGGAGTATGCTTTTAGACAGCTTTTTGATTACGTAATGGAAAAGGGAAGGTTAGAAGAAGACGAAGCTCGTAATATTTTTCAGCAGATAATCTCAGGATTGGAGTATTGTCACAATAAGACGGTGATTCACAGAGATTTGAAACCTGAAAACATACTTTTGGACTTCAACTCTGATGTCAAGATATCTGGTTTTGGCTGGAGCAACATCATGCGTCATGGTTACTTTCTAAAGACAAGTTCTGGAAGCCCTAACTATGCAGCTCCTGAGGTTTTAAATTTTATGATCTCA 558 0.362 MDAGMDMFLKNYKFEKTDGFVSMLGKIKIAEHVLTGEKVIIQILKRAKKNNMKIEEQVKLELEVLKLLNHPRIIKLHDVIETPTDTCFVMEYAFRQLFDYVMEKGRLEEDEARNIFQQIISGLEYCHNKTVIHRDLKPENILLDFNSDVKISGFGWSNIMRHGYFLKTSSGSPNYAAPEVLNFMIS 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00934 186 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 24 181 - -
Vimu6g00934 186 Pfam Protein kinase domain 25 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu6g00934 186 Coils Coil 44 64 - -
Vimu6g00934 186 SMART serkin_6 12 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu6g00934 186 FunFam Maternal embryonic leucine zipper kinase 2 184 - -
Vimu6g00934 186 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Vimu6g00934 186 ProSiteProfiles Protein kinase domain profile. 1 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu6g00934 186 SUPERFAMILY Protein kinase-like (PK-like) 25 182 IPR011009 -
Vimu6g00934 186 Gene3D Transferase(Phosphotransferase) domain 1 3 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00934 Vimu-Chr6 10268725 10270636 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00934 12 182 CBL-interacting serine-threonine protein kinases AT4G24400 42.775 1.63e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Vimu6g00934 Pkinase 2.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00934 K07198 - gmx:100806916 231.876