Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00877 ATGTTTGGTCCTACTAGTCCTACTAGACCTACTAATACGAATTCTTTGAAAGACTTGCTTCCAATGACGTACAAGAATAGGGTGACGAGCATCTTACTGAGCACATCATTGGTATTGAGCACCACAATTATTGCCCTTGTTGTCCCTTTCTTTGGGTCTCTGATGTCATTGGTTGGAGCCTTTCTAAGTGTCACAGCGTCTATTCTGTTTTCGTGCTTGTGTTACTTGAAGATTTCAGACACTTACAGGAAATTTGGGTGTGAGACGATAGCCATAGTGATAATAATAATGACAACTATTGTAATGGCAATTTCGGGTATGTACATCTCTCTCATGGAAATAGCCCACAATTTATAA 357 0.395 MFGPTSPTRPTNTNSLKDLLPMTYKNRVTSILLSTSLVLSTTIIALVVPFFGSLMSLVGAFLSVTASILFSCLCYLKISDTYRKFGCETIAIVIIIMTTIVMAISGMYISLMEIAHNL 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00877 118 Pfam Transmembrane amino acid transporter protein 26 109 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00877 Vimu-Chr6 9712127 9714581 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00877 14 114 Amino Acid or Auxin Permease AAAP Family AT3G28960 47.059 3.70e-25 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00877 K15015 - gmx:100794374 136.732