LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu6g00875	GTTCCTTTACTTCTCAATGATGAGGAGAAAGCCATTTCCTCTTGTCCTTCTGCCATAAATACTTTATCCTTCTTTCCTACATGCCTTAATGGACTCAATACAATAGCAGGTGTTGGCATACTCTCAATTCCTTATGCTCTTGCAACAGGAGTTTGGTTGGACAACTTGAGTCTACTCTCTTATGTATCTGCAAGTGGAGTCTTTGCTTCTGTTCTCGTCATCCTTTCAATAACATGGACTGCAATATTTGATGGAGTTGGTTTTCATCATAAAGGAACTCTTGTCCATTGGAATGGTCTCCCCACAGCTGTTAGTTTGTATGCCTTCTGTTATTGCACACATCCTGTCTTTCCCACGTTGTACAATTCGATGAGAAACAAACATCAGTTCTCTAAAGTCCTACTAGTATGCTTTTTCCTAACCACAATCGATTATGCATCTATGACTATAGTGGGTTATTTAATGTTTGGTGAGGAGGTTGAATCACAAGTAACATTGAACCTGCCTATGCACAAAGTCAGCTCAAAATTAGTAATATACACAACCTTGGTGAATCCCGTATCCAAGTTTGCTTTGATGGCAACACCTATTACGAACGCTTTGATAGACTTGCTTCCAATGACGTACAAGAATAGGGTGATGAGCATCTTACTATGCACATCGTTGGTATTGAGCACCACCATTTTTGCCCTTACTGTCCCTTTCTTTGGGTCTCTAATGTCACTGGTTGGAGCCTTTCTAAGTGTCACAGCTTCTATTCTGCTTTTGTGCTTGTGCTACTTGAAGATTTCAGGCACTTATAGGAAATTTGGGTGTGAGACGGTAGCCATAGTGATAATAATAATGACAACTATTTTAATGGCAATTTCAGGGACATACACCTCTCTCATGGAAATAACCGACAATTTATAA	912	0.3969	VPLLLNDEEKAISSCPSAINTLSFFPTCLNGLNTIAGVGILSIPYALATGVWLDNLSLLSYVSASGVFASVLVILSITWTAIFDGVGFHHKGTLVHWNGLPTAVSLYAFCYCTHPVFPTLYNSMRNKHQFSKVLLVCFFLTTIDYASMTIVGYLMFGEEVESQVTLNLPMHKVSSKLVIYTTLVNPVSKFALMATPITNALIDLLPMTYKNRVMSILLCTSLVLSTTIFALTVPFFGSLMSLVGAFLSVTASILLLCLCYLKISGTYRKFGCETVAIVIIIMTTILMAISGTYTSLMEITDNL	303

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu6g00875	303	Pfam	Transmembrane amino acid transporter protein	53	295	IPR013057	-
	Vimu6g00875	303	PANTHER	OS05G0424000 PROTEIN-RELATED	52	286	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu6g00875	Vimu-Chr6	9709343	9710846	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu6g00875	8	52	Amino Acid or Auxin Permease AAAP Family	AT3G28960	46.667	1.99e-07	50.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu6g00875	K15015		-	gmx:100794374	400.979