Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu6g00874 | ATGGAAGGTACCAGCCAAAACACGTTTACCTTCATCACCACCTCCATCGACGCTCCAAGTCCAAGCACCCCTGAGATATCACCATCTCCTTCTGCTCTTTCAGGACTCGCACAAACTTACCCTCCTGGTTTTTCCAGAAAGGTGTTTGCGGAGGTTATCGGAACGTTTCTGTTGGTGTTCGTCGGAAGTGGTTCTGCCGGTCTCAGTGTTATTGATGAGAGCAGAGTGTCAAAGCTTGCAGCTTCAATTGCTGCAGGACTCATCGTGACAGTGATGATTTACTCAATTGGACACATTTCTGGAGCACACATGAACCCTGCGGTTTCCCTTGCTTTTGCTGCGGTGAGGCATTTTCCGTGGCCACAGTCATCATCAAAAGGGTTCAGCCAAGAGAAAAAAGAGGTAATGGTCAAGTTCACGCCTCACCGTGGACCCACGGTCCCGTTTTACGTAGTAGCTCAACTAACTGGATCCATTTCTGCTTCATACACATTGCGAGAGCTTTTCCAGCCATCAAAGGAAATTGGGGGAACAACACCTGCTGGATCACATATCCAAGCACTGATCGTGGAAATGGTGACTACTTTCACAATGGTGTTCATTTCCATGGCCGTGGCCACTGACACAAACGCTACAGGACAATTATCAGGAGTAGCAGTAGGTTCTTCTGTTTGCATATCAAGCATTGTTGCCGGACCAATATCGGGGGGATCAATGAACCCAGCAAGGACATTAGGTCCTGCAATTGCTACATCAACCTACACGGGACTTTGGGTATATTTTGTTGGACCAATTACTGGGGCAGTTTTAGCAGCATGGTCTTACAACGTCATTAGGGACACGGAACACCCTGGTTTTCCATTTTCACTATCCTCCCTTTCATTCAAGGTACGCCAAAGCGTTAGTGGAACCAAAACCGACCAACGAAACTTGGTTTGA | 939 | 0.476 | MEGTSQNTFTFITTSIDAPSPSTPEISPSPSALSGLAQTYPPGFSRKVFAEVIGTFLLVFVGSGSAGLSVIDESRVSKLAASIAAGLIVTVMIYSIGHISGAHMNPAVSLAFAAVRHFPWPQSSSKGFSQEKKEVMVKFTPHRGPTVPFYVVAQLTGSISASYTLRELFQPSKEIGGTTPAGSHIQALIVEMVTTFTMVFISMAVATDTNATGQLSGVAVGSSVCISSIVAGPISGGSMNPARTLGPAIATSTYTGLWVYFVGPITGAVLAAWSYNVIRDTEHPGFPFSLSSLSFKVRQSVSGTKTDQRNLV | 312 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu6g00874 | 312 | PANTHER | AQUAPORIN NIP2-1 | 36 | 283 | IPR034294 | - | |
Vimu6g00874 | 312 | SUPERFAMILY | Aquaporin-like | 44 | 123 | IPR023271 | - | |
Vimu6g00874 | 312 | SUPERFAMILY | Aquaporin-like | 145 | 284 | IPR023271 | - | |
Vimu6g00874 | 312 | ProSitePatterns | MIP family signature. | 103 | 111 | IPR022357 | - | |
Vimu6g00874 | 312 | Gene3D | Glycerol uptake facilitator protein. | 27 | 284 | IPR023271 | - | |
Vimu6g00874 | 312 | Pfam | Major intrinsic protein | 44 | 121 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Vimu6g00874 | 312 | Pfam | Major intrinsic protein | 146 | 275 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Vimu6g00874 | 312 | PRINTS | Major intrinsic protein family signature | 85 | 109 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Vimu6g00874 | 312 | PRINTS | Major intrinsic protein family signature | 258 | 278 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Vimu6g00874 | 312 | PRINTS | Major intrinsic protein family signature | 190 | 208 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Vimu6g00874 | 312 | PRINTS | Major intrinsic protein family signature | 221 | 243 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Vimu6g00874 | 312 | PRINTS | Major intrinsic protein family signature | 46 | 65 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu6g00874 | Vimu-Chr6 | 9679537 | 9682691 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu6g00874 | 45 | 307 | Major Intrinsic Protein MIP | AT5G37820 | 42.642 | 2.73e-64 | 204 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu6g00874 | K09874 | - | gmx:100788071 | 435.261 |