Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00867 ATGGATAACGACTCAAACATTCGAACCTACCCTGATATAGGAGAACTTGCATTTGGAAAGACAGGAAGACTAATAGTGTCAATAATCATGTACACAGAACTATATCTGGTTCTAATAGGATTCTTGATTCTAGAAGGTGATAACTTGAGCAACATATTCCCCATTGGAAAAGTTCACATAGCAGGCTTAGCAATTGGTGGGAAGCAATTATTTGTGATTATGGTTGCCCTTATCATCTTGCCCACAGTTTGGTTGGACAACCTGAGTCTACTCTCTTATGTATCTGCAAGTGGAGTCTTTGCTTATGTTCTCATCATCCTTTCAATAACATGGACGGCAACATTTGATGGAGTTGGTTTTCATCATAAAGGAACTCTTGTCCATTGGAATGGTATCCCCACAGCTGTTAGTTTGTATGCCTTCTGTTATGGTGCACATACTGTCTTTCCCACCTTGTACAATTCGATGACAAACAAACATCAGTTCTCTAAAGTCCTACTGGTATGTTTTCTCGTAACCACTGAGGGTTATGCATCCATGGCAATAGTGGGTTATTTAATGTTTGGTGAGGAGGTTGAGTCAGAAGTAACATTAAACTTGCCTCTAAACAAAGTTAGCTCAAAAGTAGCAATATACACAGCCTTGGTGAATCCCATATCCAAGTTTGCTTTGATGTTAACCCCTATTACGAATGCTTTGAAAGACTTGCTTCCAACGACCTACAAGAATAGGGTGACGAGCATCTTACTGAGCACAGTGTTGGTATTGAGCACCACCATTATTGCCCTTGTTGTCCCTTTCTTTGGGTCTCTGATTTCACTGGTTGGAGCCTTTCTAAATGTCACAGCTTCTATTTTGCTTCCGTGCTTGTGCTACTTGAAGATTTCGGACACTTACAAAAAATTTGGGTGTGAGACGGTAACTATAGTGATAATGATGATGATAGCTATTGTAATGGCAATTTCAGGAACCTACATTTCTCTCATGGAAATAGCACACAATCTACAAATGACAATGTAG 1020 0.3971 MDNDSNIRTYPDIGELAFGKTGRLIVSIIMYTELYLVLIGFLILEGDNLSNIFPIGKVHIAGLAIGGKQLFVIMVALIILPTVWLDNLSLLSYVSASGVFAYVLIILSITWTATFDGVGFHHKGTLVHWNGIPTAVSLYAFCYGAHTVFPTLYNSMTNKHQFSKVLLVCFLVTTEGYASMAIVGYLMFGEEVESEVTLNLPLNKVSSKVAIYTALVNPISKFALMLTPITNALKDLLPTTYKNRVTSILLSTVLVLSTTIIALVVPFFGSLISLVGAFLNVTASILLPCLCYLKISDTYKKFGCETVTIVIMMMIAIVMAISGTYISLMEIAHNLQMTM 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00867 339 Pfam Transmembrane amino acid transporter protein 4 325 IPR013057 -
Vimu6g00867 339 PANTHER OS05G0424000 PROTEIN-RELATED 8 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00867 Vimu-Chr6 9578946 9580054 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00867 1 331 Amino Acid or Auxin Permease AAAP Family AT3G28960 58.133 2.78e-144 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00867 K15015 - gmx:100786627 533.872