Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00834 ATGTACGGATTCGAAGCTCTCACTTTCAACATCCATGGCGGCTTTCTCGAGGCTATCGTCCGCGGCCACCGCGCAGGTCTCCTCACTACCGCCGATTACAACAACCTCTGCCAATGCGAAACCCTAGATGACATCAAGATGCACCTCTCCGCCACCGAGTACGGCCCTTACCTCCAAAACGGTGCGTTTTCTCCAATTCGCGCCCTCTCCCTGATCCATCACCAATCTCAATTTATCATTAATTACTTATTTCTTGGATATCGGTGTGCTTGTGATTATTGTGTTTCCGTTTTGAGACTCTATCTCTGCTTTCCTGGAAGTGAATGCTTCTACGATATGGCGATAACTGTGTTCGACACGTGTGTGGATTCGAAGTGGATATGTGATAAGGAGCGTTTCTCAAAATTTTTAGGAGATGTTATGTAG 426 0.4695 MYGFEALTFNIHGGFLEAIVRGHRAGLLTTADYNNLCQCETLDDIKMHLSATEYGPYLQNGAFSPIRALSLIHHQSQFIINYLFLGYRCACDYCVSVLRLYLCFPGSECFYDMAITVFDTCVDSKWICDKERFSKFLGDVM 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00834 141 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT AC39 1 65 IPR016727 GO:0033179|GO:0046961|GO:1902600
Vimu6g00834 141 Pfam ATP synthase (C/AC39) subunit 16 62 IPR002843 GO:0046961
Vimu6g00834 141 SUPERFAMILY V-type ATP synthase subunit C 15 67 IPR036079 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00834 1 73 Primary Pumps ATPases(2) AT3G28715 80.822 2.53e-37 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00834 K02146 - gmx:100800553 130.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00834 6 9245688 9246113 Vimu6g00834 6 9245688 9246113 ECH