Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00831 ATGGAAATGATGAAACATAACATTATAGAGGTGAGCCTTGGGAAGAGCCAAATTTCCATGGCAGAAGGTGAACTTCAAGCTACACGGTGTGTCAAGAGACGAAGAAGAGAGGTTGCTGCAGCAGTTAGCAGTGGTGACGATAGCCACCACCAGCAGTTACCAAAACAACACGGTGGTGAAAATTCTACAATCAACACAACAAAGAGAAGCTCAAAATTTCGTGGTGTTAGCAGAAAGAGCAGCACCCAAGAGGAAGCTGCACGAGCTTATGACTTAGCGGCCATTGAGTACAGAGGGATCAATGCTGTGACAAACTTTGATTTGAGCACTTACATAAAATGGTTAAAGCCAGGAGGAGGAAGCACCCCAGAAGCAAAACTTGAAACACATGCAGTTCTAGAGGGTCAAAAGGTGGCATCCCCATCTAATTATTCTCTAACAGAAGAGTCAAAATCTTCAGTCATTCACAACAGTTTTTTCAGCCTAGATTCTCTGAATTCCCCAGTAGGGCAAGAAAATTTTGGAAACAAACCCTACCAATTCTCAAGCAGTAAGTCATCTTCTCCCACTGCACTTGGCCTTCTTCTCCGCTCTTCGTTGTTTAGAGAATTGGTTGAGAAGAATTCAAATGTATCTGGAGATGAAGCTGATGATGGGGAAGTCACAAAAAGTGAACAGCCACAAATAGCTAGTGATGATGATCTGGGTGGAATCTTCTTTGATAGTATTGGTGATATCCCATTTGTTTGTGATCCCAATAGATACAACTTGGAATTGCAAGAAAGAGACCTGCACTCAATATTTTGA 807 0.4226 MEMMKHNIIEVSLGKSQISMAEGELQATRCVKRRRREVAAAVSSGDDSHHQQLPKQHGGENSTINTTKRSSKFRGVSRKSSTQEEAARAYDLAAIEYRGINAVTNFDLSTYIKWLKPGGGSTPEAKLETHAVLEGQKVASPSNYSLTEESKSSVIHNSFFSLDSLNSPVGQENFGNKPYQFSSSKSSSPTALGLLLRSSLFRELVEKNSNVSGDEADDGEVTKSEQPQIASDDDLGGIFFDSIGDIPFVCDPNRYNLELQERDLHSIF 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00831 268 MobiDBLite consensus disorder prediction 40 85 - -
Vimu6g00831 268 MobiDBLite consensus disorder prediction 45 77 - -
Vimu6g00831 268 Gene3D AP2/ERF domain 78 109 IPR036955 GO:0003700|GO:0006355
Vimu6g00831 268 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 81 179 - -
Vimu6g00831 268 MobiDBLite consensus disorder prediction 210 233 - -
Vimu6g00831 268 SUPERFAMILY DNA-binding domain 81 109 IPR016177 GO:0003677
Vimu6g00831 268 ProSiteProfiles AP2/ERF domain profile. 27 107 IPR001471 GO:0003700|GO:0006355
Vimu6g00831 268 SMART rav1_2 72 113 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00831 Vimu-Chr6 9233737 9235682 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00831 81 150 AP2-EREBP Transcription Factor Family AT5G57390 46.667 1.62e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00831 - - gmx:100779867 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00831 6 9233737 9235682 Vimu6g00831 6 9233737 9235682 ECH