Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu6g00827 | ATGCAGTTTCCCATTGCCTCTCTCCTCCACCACCTACACCCCTTCTGGACTGATTTTCAGAACTGTGATGTTCTTCTTTTAGTTCTGTTGATTGTGACTGTGATCACGGTCGTGATCATCGTATGGGTTGCAGAGTCTTCAATTATTGGAACTCTTTCTAAGACTCTGTGGAAGATGGGGTTTGGGAATAATGCAATTCAAGCAGGGAGTTTGGATGTGGGGAAGTCAAAGGTTAAGATGCAAAAGGCTGGTGCTGAAAAGGAAATTGGGTGCTGTGTTAAATTCTGTTTCATTGGGAGCTGTATACCTTCAAGATCAAAGGTTGATACTTCCATCAGTGGCACTAGTGCTAACAGTGTGGAAAAAGCATCTGCATATGAGAAAAACAAGAAGGAAACAAATGCTCTTCCAGGGTCCTCTACAACAACCAGTAATGCAGAAAGTATCCCTTCCACCCCAAAATTCAGTGAGGAGTTGAAGGTTTCTTCTCGTTTGAGAAAATTTACATTCAACGAGCTTAAGTTGGCCACTAGGAATTTCAGACCAGAGAGTCTTCTTGGTGAGGGAGGGTTTGGATGTGTTTTCAAGGGTTGGATCGAAGAAAATGGTACTGCACCTGTGAAACCTGGTACCGGGCTTACTGTAGCTGTGAAAACTCTCAACCATGATGGGCTTCAGGGTCACAAAGAGTGGCTTGCAGAGTTAGACATTCTTGGTGACCTCGTCCATCCAAATCTGGTCAAATTGGTTGGTTTCTGTATTGAAGATGACCAAAGATTGTTGGTTTATGAATGCATGCCCCGTGGAAGTTTGGAGAACCACCTCTTCAGAAAAGGGTCGTTGCCTCTTCCTTGGTCTATCAGAATGAAAATTGCACTTGGTGCTGCAAAAGGTCTTTCTTTTCTCCATGAAGAAGCCCAGCGACCTGTAATCTATCGTGATTTTAAGACATCTAATATTCTGTTGGATGCGGAATACAATGCAAAGCTCTCTGATTTTGGACTTGCCAAAGATGGTCCTGAAGGGGAAAAGACACACATATCAACAAGAGTCATGGGAACATATGGTTATGCAGCTCCTGAGTATGTGATGACTGGACACTTGACATCAAAAAGTGATGTCTATAGTTTTGGAGTAGTACTGCTAGAAATGCTGACCGGGCGGCGATCCATCGATAAGAACAGACCAAATGGGGAACACAATCTTGTGGAGTGGGCAAGGCCTGTGCTTGGCGACAGGAGGATGTTACTACGGATCATTGATCCTCGCCTTGAAGGTCACTTCTCTGTTAAAGGGGCTCAGAAGGCTGCACAGCTGGCTGCTCAATGCCTTTGCCGTGATCCAAAATCCAGACCTATGATGAGTGATGTTGTTCATGCTTTGAAGCATTTGCAAAACCTCAAGGATATGGCCATCTCAACTTTTCATTTTCAGGTTGCACGAGTGGATCGAACCATGTCCATGCCAACTTCTAAAAATGGTATGCAAGCACAGTTAACAATATCAAGGAAGGGTCAACCTGCAAGGTCCTTGTCAAGTCCAAAAGGCCCTCATGGTTCTCCTTATCATCATTATGTCAAGTCACCAAAACCAAATGGATGA | 1602 | 0.4413 | MQFPIASLLHHLHPFWTDFQNCDVLLLVLLIVTVITVVIIVWVAESSIIGTLSKTLWKMGFGNNAIQAGSLDVGKSKVKMQKAGAEKEIGCCVKFCFIGSCIPSRSKVDTSISGTSANSVEKASAYEKNKKETNALPGSSTTTSNAESIPSTPKFSEELKVSSRLRKFTFNELKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAELDILGDLVHPNLVKLVGFCIEDDQRLLVYECMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLSFLHEEAQRPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGEKTHISTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSIDKNRPNGEHNLVEWARPVLGDRRMLLRIIDPRLEGHFSVKGAQKAAQLAAQCLCRDPKSRPMMSDVVHALKHLQNLKDMAISTFHFQVARVDRTMSMPTSKNGMQAQLTISRKGQPARSLSSPKGPHGSPYHHYVKSPKPNG | 533 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu6g00827 | 533 | Gene3D | Phosphorylase Kinase; domain 1 | 160 | 265 | - | - | |
Vimu6g00827 | 533 | MobiDBLite | consensus disorder prediction | 489 | 533 | - | - | |
Vimu6g00827 | 533 | SUPERFAMILY | Protein kinase-like (PK-like) | 154 | 461 | IPR011009 | - | |
Vimu6g00827 | 533 | MobiDBLite | consensus disorder prediction | 124 | 153 | - | - | |
Vimu6g00827 | 533 | ProSitePatterns | Protein kinases ATP-binding region signature. | 186 | 218 | IPR017441 | GO:0005524 | |
Vimu6g00827 | 533 | FunFam | Serine/threonine-protein kinase BIK1 | 147 | 265 | - | - | |
Vimu6g00827 | 533 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 310 | 322 | IPR008271 | GO:0004672|GO:0006468 | |
Vimu6g00827 | 533 | Pfam | Protein kinase domain | 183 | 459 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu6g00827 | 533 | ProSiteProfiles | Protein kinase domain profile. | 180 | 462 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu6g00827 | 533 | MobiDBLite | consensus disorder prediction | 133 | 153 | - | - | |
Vimu6g00827 | 533 | MobiDBLite | consensus disorder prediction | 489 | 509 | - | - | |
Vimu6g00827 | 533 | PANTHER | OS01G0588500 PROTEIN-RELATED | 136 | 465 | - | - | |
Vimu6g00827 | 533 | CDD | STKc_IRAK | 186 | 464 | - | - | |
Vimu6g00827 | 533 | FunFam | Probable serine/threonine-protein kinase PBL8 | 266 | 480 | - | - | |
Vimu6g00827 | 533 | Gene3D | Transferase(Phosphotransferase) domain 1 | 266 | 483 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu6g00827 | Vimu-Chr6 | 9195818 | 9200424 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu6g00827 | 138 | 477 | Glycoside Hydrolase | AT3G07070 | 51.989 | 1.20e-116 | 349 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Vimu6g00827 | Pkinase | 5.3e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu6g00827 | - | - | vum:124829441 | 983.786 |