Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu6g00823 | ATGAATTTCAACTTGGAATATTATCTAACCTCCTTGCTTTTTTCTTTTCAGAATTTTTTGTACACTAAAAAGGATGAAAGTTCTGAGTTGAAAGCTATAGACTTTGGGTTATCAGATTTTGTCAGACCAGATGAAAAGCTTAATGATATTGTTGGAAGTGCATATTATGTGGCCCCTGAAGTTCTCCATAGATCTTACAGCACAGAGGCTGATGTGTGGATTCTGAAAGCTGATCCTAGCTTTGATGAAACACCGGGGCCATCTTTATCTTCAGAAGCAAAGGATTTTGTCAAACGCTTACTGAATAAGGACCCACGGAAGCGGATATCTGCTGCACAGGCTCTAACTCATGAAGATATATATGAGATATCATCATTCTTACGCAAGGCTGCCTTAAGGGCCTTGTCAAAGACACTGACTGCAGATGAACTCTATTATCTGAGGGAGCAATTTTCACTGCTCGAACCAAGCAAAAATCGCAGCATATCTTTAGAGAATGTTAACAAGGTTAGTCATCACACAATGTGTATGAAGTTTATCTATGTTAGATTCCACAAGCTTTTTCTAATTCATACATTCTGGGCAGGTCTTGGTGAAATATGCAACATATGCCATGAAAGATTCTCGCATCTCGCATCCCTGACTTTCTTTCCTTGGGCTATTGTCATTGAAGAGCTTGCTTCAGTACGTTCAGAAAAGAACACTTCACTCTTAGGCTATTAG | 723 | 0.3914 | MNFNLEYYLTSLLFSFQNFLYTKKDESSELKAIDFGLSDFVRPDEKLNDIVGSAYYVAPEVLHRSYSTEADVWILKADPSFDETPGPSLSSEAKDFVKRLLNKDPRKRISAAQALTHEDIYEISSFLRKAALRALSKTLTADELYYLREQFSLLEPSKNRSISLENVNKVSHHTMCMKFIYVRFHKLFLIHTFWAGLGEICNICHERFSHLASLTFFPWAIVIEELASVRSEKNTSLLGY | 240 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu6g00823 | 240 | Gene3D | Transferase(Phosphotransferase) domain 1 | 76 | 150 | - | - | |
Vimu6g00823 | 240 | SUPERFAMILY | Protein kinase-like (PK-like) | 17 | 145 | IPR011009 | - | |
Vimu6g00823 | 240 | SMART | serkin_6 | 1 | 120 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu6g00823 | 240 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 17 | 74 | - | - | |
Vimu6g00823 | 240 | Gene3D | Transferase(Phosphotransferase) domain 1 | 14 | 75 | - | - | |
Vimu6g00823 | 240 | ProSiteProfiles | Protein kinase domain profile. | 1 | 120 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu6g00823 | 240 | Pfam | Protein kinase domain | 17 | 73 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu6g00823 | Vimu-Chr6 | 9172054 | 9173358 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu6g00823 | 17 | 167 | EF-hand Containing Proteins | AT3G50530 | 53.275 | 4.35e-64 | 208 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Vimu6g00823 | Pkinase | 4.3e-11 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu6g00823 | K13412 | - | gmx:100798913 | 244.202 |