Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00823 ATGAATTTCAACTTGGAATATTATCTAACCTCCTTGCTTTTTTCTTTTCAGAATTTTTTGTACACTAAAAAGGATGAAAGTTCTGAGTTGAAAGCTATAGACTTTGGGTTATCAGATTTTGTCAGACCAGATGAAAAGCTTAATGATATTGTTGGAAGTGCATATTATGTGGCCCCTGAAGTTCTCCATAGATCTTACAGCACAGAGGCTGATGTGTGGATTCTGAAAGCTGATCCTAGCTTTGATGAAACACCGGGGCCATCTTTATCTTCAGAAGCAAAGGATTTTGTCAAACGCTTACTGAATAAGGACCCACGGAAGCGGATATCTGCTGCACAGGCTCTAACTCATGAAGATATATATGAGATATCATCATTCTTACGCAAGGCTGCCTTAAGGGCCTTGTCAAAGACACTGACTGCAGATGAACTCTATTATCTGAGGGAGCAATTTTCACTGCTCGAACCAAGCAAAAATCGCAGCATATCTTTAGAGAATGTTAACAAGGTTAGTCATCACACAATGTGTATGAAGTTTATCTATGTTAGATTCCACAAGCTTTTTCTAATTCATACATTCTGGGCAGGTCTTGGTGAAATATGCAACATATGCCATGAAAGATTCTCGCATCTCGCATCCCTGACTTTCTTTCCTTGGGCTATTGTCATTGAAGAGCTTGCTTCAGTACGTTCAGAAAAGAACACTTCACTCTTAGGCTATTAG 723 0.3914 MNFNLEYYLTSLLFSFQNFLYTKKDESSELKAIDFGLSDFVRPDEKLNDIVGSAYYVAPEVLHRSYSTEADVWILKADPSFDETPGPSLSSEAKDFVKRLLNKDPRKRISAAQALTHEDIYEISSFLRKAALRALSKTLTADELYYLREQFSLLEPSKNRSISLENVNKVSHHTMCMKFIYVRFHKLFLIHTFWAGLGEICNICHERFSHLASLTFFPWAIVIEELASVRSEKNTSLLGY 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00823 240 Gene3D Transferase(Phosphotransferase) domain 1 76 150 - -
Vimu6g00823 240 SUPERFAMILY Protein kinase-like (PK-like) 17 145 IPR011009 -
Vimu6g00823 240 SMART serkin_6 1 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu6g00823 240 PANTHER SERINE/THREONINE-PROTEIN KINASE 17 74 - -
Vimu6g00823 240 Gene3D Transferase(Phosphotransferase) domain 1 14 75 - -
Vimu6g00823 240 ProSiteProfiles Protein kinase domain profile. 1 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu6g00823 240 Pfam Protein kinase domain 17 73 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00823 Vimu-Chr6 9172054 9173358 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00823 17 167 EF-hand Containing Proteins AT3G50530 53.275 4.35e-64 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Vimu6g00823 Pkinase 4.3e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00823 K13412 - gmx:100798913 244.202