Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu6g00811 | ATGGTATTGAGTGAACATAATTTAGTGAAACTTCAGTTTCTCATTAAAATAGCTTCTATTAATTACCTCTCTTCCCAAACCATGCAGCTTTTGGTTTCCAATTTCCATCTTGTTATTTATGTTTTGCTTTTCATAGGCTCTGTTTTAGAGTTGAGATCCGCGTCGTCTACAGCATCGCAGCTTCAATTGGAAGCAAACGCTATAATCAATAGTGGATGGTGGAATTTGTCGCACAAAGATTCAACTGATATATGTTCATTGATTGATGATATAAGTTGCAATGATGCTGGAAGTGTAACTCGTATCACATATCTGTATACCAAGCGACGGATTCAATTAGCAACTCTAAACCTTTCCGCTTTCAAGAATTTAGAAACTCTCGAGGTCTGTTACTCTAGTCTAGAAGGGACTATCCCACCTGAAATTGGCAGTATTTCTAAACTAAGCCGTCTTCGTTTGTCTCACAATTATTTTCTTCAAGGTAAAATACCTTTCACAATAGAAAATCTTCTCAATCTTACTTATCTTGATTTATCTTACAATTATCTTCAAGGTAAAATACCTACTGCGATAGGAAGTCTTTTCAAACTCACTCATCTTGATTTATCCTTCAATTTTCTTTGGGGTGAAATATGTCACATAGAAAATATTTCTAAACTCACTCATCTTTATTTGTCCAACAATTCTCTTCAAGGCAAAATACCTTTCACAGTAGAAAATCTTTCCAATCTCACTTATGTTGATTTGTCCCACAATTATTTTCATGGGGAAATCCCTATTAAAATAGGAAATTTTTCCAAACTCATATATCTTGATTTATCTTACAATTTTCTTCAAGGTAAAATACCTACCACGATAGAAAGTCTTTCCAAACTTACTCATCTAAAATTGTCTCACAATTCTATTTTTGGTGAGATACCTCCTACAATAGGAAACCTTTCCAAACTCACTCATCTTGAATTGTCTCACAATTATATTCATGGAGAAATACCTCCTACAATAGGAAATCTTTCCAAACTCACTTATCTTGATTTATCCTACAACTCTCTTCAAGATGAAATACCTCCATCACTAGGAAATCTTTCAAAACTCACTTATCTTAATTTATCCTACAATTCTCTTCAAGATAAAATACCTCCATCACTAGGAAATCTTTCAAAACTTACTTATCTTGTTTTATCCTACAATTCTCTTCAAGATGAAATACCTCCATCACTAGGAAATCTTTCAAAACTCACTTATCTTGATTTATCCTACAATTCTCTTCAAGATGAAATACCTCCATCACTAGGAAATCTTTCAAAACTTACTTATCTTGTTTTATCCTACAATTCTCTTCAAGATGAAATACCTCCATCACTAGGAAATCTTTCAAAACTCACTTATCTTGATTTATCTCACAATTCTCTTCAAGATGAAATACCTCCATCACTAGGAAATCTTTCAAAACTCACTTATCTTGATTTATCTCACAATTCTCTTCAAGATGAAATACCTCCATCACTAGGAAATCTTTCAAAACTCACTCATCTTGATTTATCTCATAATTCTCTTCAAGATGAAATTCCTCCATCACTAGGAAATCTTTCAAAACTCACTTATCTTTATTTATCCAACAATTTTCTTCAAGGTGAAATACCTTCATCATTAGGATATCCCAGAATCCATTACCTGGACCTTTCCTTCAATAATTTGAATGGACCCATTCCAAATGGTGTACGTCCATATGCACTAACGGGGAATAAAGGTGTATGCAGCAACTCTACAAATATACAAATTGAATACCAATTCCAGCCTTGTTCGGTCAACCAGAAGAAACGAAGGCAGCTAGTGATAATTCTTTCCATCACCATATTTCTAATCTTGGCCTTCTTACTACTTTTATGTCTGAGACACATCCGCATTTCAATCAAGAGCAAACATGCAAGGATAACTGAAACATCTAAGAATGGGGACTTGTTCTGCATTTGGAATTATGACGGAAGCATAGCCTATGAAGACATCATTACAGTAACTGAAGACTTTGATCTCAAATATTGTATCGGAACAGGTGCGTATGGAAGTGTCTATAGGGCTCAATTACCTACTGGAAAGATTGTTGCGGTGAAGAAACTCCATGGCTTTGAAGCAGAGGTCCCCACTTTTGATGAGAGTTTCAGAAACGAAGCCAAAGTATTATCGGAAATAAAGCACCGACATATAGTCAAGCTCCATGGATTCTGCTTGCACAAAAGAATAATGTTTTTGATCTATGAGTACATGGAGAAAGGAAGCTTGTTTTCTGTGTTGTTTGATGACATGGAAGCAATGGAATTGGATTGGAAAAGGAGGGTTAACATAGTGAAAGGCACTGCACATGCTCTCTCATATCTCCATCATGATTGTGTCCCTCCAATAGTCCATAGAGACATATCAGCAAGCAACGTCTTGCTTAACTCCAAGTGGGAGCCCACTATTTCCGACTTTGGCACAGCCCGATTTATCAACCTTGATTCGTCCAATCGAACTATAGTTGCTGGAACCATTGGATACATAGCACCTGGTAAATTGTTCATGTTTTTCTCTACTTTTATTTATTTATGA | 2583 | 0.3539 | MVLSEHNLVKLQFLIKIASINYLSSQTMQLLVSNFHLVIYVLLFIGSVLELRSASSTASQLQLEANAIINSGWWNLSHKDSTDICSLIDDISCNDAGSVTRITYLYTKRRIQLATLNLSAFKNLETLEVCYSSLEGTIPPEIGSISKLSRLRLSHNYFLQGKIPFTIENLLNLTYLDLSYNYLQGKIPTAIGSLFKLTHLDLSFNFLWGEICHIENISKLTHLYLSNNSLQGKIPFTVENLSNLTYVDLSHNYFHGEIPIKIGNFSKLIYLDLSYNFLQGKIPTTIESLSKLTHLKLSHNSIFGEIPPTIGNLSKLTHLELSHNYIHGEIPPTIGNLSKLTYLDLSYNSLQDEIPPSLGNLSKLTYLNLSYNSLQDKIPPSLGNLSKLTYLVLSYNSLQDEIPPSLGNLSKLTYLDLSYNSLQDEIPPSLGNLSKLTYLVLSYNSLQDEIPPSLGNLSKLTYLDLSHNSLQDEIPPSLGNLSKLTYLDLSHNSLQDEIPPSLGNLSKLTHLDLSHNSLQDEIPPSLGNLSKLTYLYLSNNFLQGEIPSSLGYPRIHYLDLSFNNLNGPIPNGVRPYALTGNKGVCSNSTNIQIEYQFQPCSVNQKKRRQLVIILSITIFLILAFLLLLCLRHIRISIKSKHARITETSKNGDLFCIWNYDGSIAYEDIITVTEDFDLKYCIGTGAYGSVYRAQLPTGKIVAVKKLHGFEAEVPTFDESFRNEAKVLSEIKHRHIVKLHGFCLHKRIMFLIYEYMEKGSLFSVLFDDMEAMELDWKRRVNIVKGTAHALSYLHHDCVPPIVHRDISASNVLLNSKWEPTISDFGTARFINLDSSNRTIVAGTIGYIAPGKLFMFFSTFIYL | 860 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu6g00811 | 860 | SUPERFAMILY | RNI-like | 222 | 575 | - | - | |
Vimu6g00811 | 860 | FunFam | Leucine-rich repeat receptor-like protein kinase TDR | 380 | 601 | - | - | |
Vimu6g00811 | 860 | SMART | LRR_typ_2 | 457 | 480 | IPR003591 | - | |
Vimu6g00811 | 860 | SMART | LRR_typ_2 | 170 | 194 | IPR003591 | - | |
Vimu6g00811 | 860 | SMART | LRR_typ_2 | 241 | 265 | IPR003591 | - | |
Vimu6g00811 | 860 | SMART | LRR_typ_2 | 361 | 384 | IPR003591 | - | |
Vimu6g00811 | 860 | SMART | LRR_typ_2 | 505 | 528 | IPR003591 | - | |
Vimu6g00811 | 860 | SMART | LRR_typ_2 | 529 | 553 | IPR003591 | - | |
Vimu6g00811 | 860 | SMART | LRR_typ_2 | 337 | 360 | IPR003591 | - | |
Vimu6g00811 | 860 | SMART | LRR_typ_2 | 433 | 456 | IPR003591 | - | |
Vimu6g00811 | 860 | SMART | LRR_typ_2 | 289 | 312 | IPR003591 | - | |
Vimu6g00811 | 860 | SMART | LRR_typ_2 | 481 | 504 | IPR003591 | - | |
Vimu6g00811 | 860 | SMART | LRR_typ_2 | 313 | 336 | IPR003591 | - | |
Vimu6g00811 | 860 | SMART | LRR_typ_2 | 409 | 432 | IPR003591 | - | |
Vimu6g00811 | 860 | SMART | LRR_typ_2 | 385 | 408 | IPR003591 | - | |
Vimu6g00811 | 860 | Pfam | Leucine rich repeat | 339 | 398 | IPR001611 | GO:0005515 | |
Vimu6g00811 | 860 | Pfam | Leucine rich repeat | 264 | 302 | IPR001611 | GO:0005515 | |
Vimu6g00811 | 860 | Pfam | Leucine rich repeat | 147 | 205 | IPR001611 | GO:0005515 | |
Vimu6g00811 | 860 | Pfam | Leucine rich repeat | 459 | 518 | IPR001611 | GO:0005515 | |
Vimu6g00811 | 860 | Pfam | Leucine Rich repeats (2 copies) | 219 | 252 | IPR025875 | - | |
Vimu6g00811 | 860 | Gene3D | Phosphorylase Kinase; domain 1 | 636 | 753 | - | - | |
Vimu6g00811 | 860 | ProSiteProfiles | Protein kinase domain profile. | 675 | 860 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu6g00811 | 860 | Pfam | Leucine Rich Repeat | 531 | 550 | IPR001611 | GO:0005515 | |
Vimu6g00811 | 860 | Pfam | Leucine Rich Repeat | 411 | 433 | IPR001611 | GO:0005515 | |
Vimu6g00811 | 860 | Pfam | Leucine Rich Repeat | 315 | 337 | IPR001611 | GO:0005515 | |
Vimu6g00811 | 860 | Gene3D | Transferase(Phosphotransferase) domain 1 | 754 | 851 | - | - | |
Vimu6g00811 | 860 | Pfam | Protein kinase domain | 680 | 847 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu6g00811 | 860 | FunFam | Leucine-rich repeat protein kinase family protein | 639 | 753 | - | - | |
Vimu6g00811 | 860 | SMART | LRR_sd22_2 | 505 | 531 | - | - | |
Vimu6g00811 | 860 | SMART | LRR_sd22_2 | 313 | 339 | - | - | |
Vimu6g00811 | 860 | SMART | LRR_sd22_2 | 265 | 291 | - | - | |
Vimu6g00811 | 860 | SMART | LRR_sd22_2 | 457 | 483 | - | - | |
Vimu6g00811 | 860 | SMART | LRR_sd22_2 | 409 | 435 | - | - | |
Vimu6g00811 | 860 | SMART | LRR_sd22_2 | 220 | 243 | - | - | |
Vimu6g00811 | 860 | SMART | LRR_sd22_2 | 361 | 387 | - | - | |
Vimu6g00811 | 860 | SMART | LRR_sd22_2 | 194 | 219 | - | - | |
Vimu6g00811 | 860 | Gene3D | Ribonuclease Inhibitor | 213 | 279 | IPR032675 | - | |
Vimu6g00811 | 860 | ProSitePatterns | Protein kinases ATP-binding region signature. | 681 | 704 | IPR017441 | GO:0005524 | |
Vimu6g00811 | 860 | Gene3D | Ribonuclease Inhibitor | 280 | 377 | IPR032675 | - | |
Vimu6g00811 | 860 | Gene3D | Ribonuclease Inhibitor | 378 | 472 | IPR032675 | - | |
Vimu6g00811 | 860 | Gene3D | Ribonuclease Inhibitor | 56 | 212 | IPR032675 | - | |
Vimu6g00811 | 860 | Gene3D | Ribonuclease Inhibitor | 473 | 593 | IPR032675 | - | |
Vimu6g00811 | 860 | FunFam | LRR receptor-like serine/threonine-protein kinase GSO1 | 117 | 379 | - | - | |
Vimu6g00811 | 860 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 300 | 847 | - | - | |
Vimu6g00811 | 860 | ProSiteProfiles | Leucine-rich repeat profile. | 507 | 530 | IPR001611 | GO:0005515 | |
Vimu6g00811 | 860 | ProSiteProfiles | Leucine-rich repeat profile. | 459 | 482 | IPR001611 | GO:0005515 | |
Vimu6g00811 | 860 | FunFam | Os07g0541700 protein | 754 | 841 | - | - | |
Vimu6g00811 | 860 | ProSiteProfiles | Leucine-rich repeat profile. | 483 | 506 | IPR001611 | GO:0005515 | |
Vimu6g00811 | 860 | PRINTS | Leucine-rich repeat signature | 460 | 473 | - | - | |
Vimu6g00811 | 860 | PRINTS | Leucine-rich repeat signature | 481 | 494 | - | - | |
Vimu6g00811 | 860 | SUPERFAMILY | L domain-like | 93 | 284 | - | - | |
Vimu6g00811 | 860 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 799 | 811 | IPR008266 | GO:0004672|GO:0006468 | |
Vimu6g00811 | 860 | SUPERFAMILY | Protein kinase-like (PK-like) | 658 | 851 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu6g00811 | Vimu-Chr6 | 9046236 | 9048818 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu6g00811 | 39 | 851 | Receptor kinase-like Gene Family | AT4G08850 | 36.034 | 9.97e-162 | 496 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Vimu6g00811 | Pkinase | 4e-33 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu6g00811 | - | - | vum:124822324 | 834.713 |