Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00787 ATGGATCCCTTCAAAGGACAAGGAGGCATTCAGATGCTGCTAACCGCTGAACAAGAAGCACAACACATTATTTCTAATGCAAGAAATTGTAAGACCTCAATCCTCTCATACAATGTTGTTATCAAGGTTTTAGAAAAGCTAACCCAAAGGTTGAAGCAGGCAAAGGAAGAGGCTGAGAAAGAGGCTGCACAATACAGATCTCACATGGAAGATGAGTATCAAAATTCAATTTCAGAGACCACAGGGACTTCTGGATCTAATGTGAAAAGGCTTGAGGAGGAGACAGAGGCTAAGATTAAACAGTTAAAGAAATCAACTTCAGATGTCTCATCAAAAGTGGTTGAAATGCTCCTCAAGTGTGTTACAAATATCAAAATATAA 381 0.3885 MDPFKGQGGIQMLLTAEQEAQHIISNARNCKTSILSYNVVIKVLEKLTQRLKQAKEEAEKEAAQYRSHMEDEYQNSISETTGTSGSNVKRLEEETEAKIKQLKKSTSDVSSKVVEMLLKCVTNIKI 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00787 126 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 125 IPR005124 GO:0016471|GO:0046961|GO:1902600
Vimu6g00787 126 FunFam V-type proton ATPase subunit G 3 126 - -
Vimu6g00787 126 MobiDBLite consensus disorder prediction 59 89 - -
Vimu6g00787 126 MobiDBLite consensus disorder prediction 69 88 - -
Vimu6g00787 126 Coils Coil 37 75 - -
Vimu6g00787 126 Coils Coil 88 108 - -
Vimu6g00787 126 Gene3D - 3 126 - -
Vimu6g00787 126 Pfam Vacuolar (H+)-ATPase G subunit 39 125 IPR005124 GO:0016471|GO:0046961|GO:1902600
Vimu6g00787 126 NCBIfam V-type ATPase subunit G 8 125 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00787 8 124 Primary Pumps ATPases(2) AT4G23710 47.009 1.07e-28 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00787 K02152 - gmx:100818549 152.91