Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00773 ATGGAGAGGGTTGCAGAGCCAAAGGTACTTCCTCGGTCCTTGCCTGTTCTGGTTGAGGTATCTAATGCGCACACTGCTGCAATGAGAGAAGCTGGTCAAAGACTAAATGCGCAGGATGTTTCGGGTGTGAGAGGGATTCCATCAAGAGAAGGGAATCAGTTTTCAAAGTCACGAGATGGCCCCATGACACGTCTTGCCTCCATCAGAGAAGTGGCTCAGTTATCAAATGCACGAATAGTTTTGGTTAGAGAGGATATGGGCTTCGATACACGGTCCTGTCAAGAGCCTCCCTCCCCTGTTCCTACAAGAATGTGGAAAGGAAAGAGCTCTTTACCTGAAGCCGTAGAACTTGTGCCTGATATTCAGACATTGAAGGGTAGCAATGATTCTTTAGGGGAAACTGGTCCAAGTTCATTTGCTGGTGCAAGTCATCCCCCAGAACCTGTTGATACTGATCTTATGAGAACGGTTTATGTGCCAATAGGTCAAACCAAATCTGAGGCAGCATGCTTGATGAAGAGTGTGTCCTTGAAGGGTCCTGGTCCTTTCTTAGAAGATCTTTCAATTTGTGTTCCTGCCAAGAAACAAAGCATGGCTGTTGTTTCTCCTGCAGAAAGCATTGGTGAGTCAAATGAGACACATAACATACCCTCGCCACTTTCGGGTGCTCGTGCATCTCAGAATACCGAGAACTCTCCTCCTGCTCCAGATTCTGAGGAGAAAGAATGTGTTTGGGATGCATCTTTGCCTCCAAGTGGTAATGTTAGTCCCCTTAGTAGTATTGATAGTACTAGTGTTGTCAGAACAATGAGCATTGTTAATAGTTGTGCAAGTACATACCGGAGTGATGCAGTCACTAGCGATGGAATGCTTAGTTTGGACAGGAATTGTGATAGCACTAAAGGAAGTGTTAGAGGCGATTCACTGGAGAGTGCAAAAACTAGTGCTAGTCGAGCAAGTGATAGCAGTGGCCTCAGTGATGACAGCAACTGGAGTAACATAACTGGTAGTGCCAATAAGCCACACAAAGGAAATGATCCTAGATGGAAGGCTATCCTTGCCATCCGAGCACGGGACGGAATTCTTGGCATGAGTCACTTCAGGTTACTCAAACGACTTGGTTGTGGTGATATTGGAAGTGTGTATCTCTCAGAGCTTAGTGCAACTCGATGCTTTTTTGCAATGAAAGTTATGGACAAGGCATCCTTAGCAAGCAGAAATAAGCTGACTAGGGCTCAGACAGAAAGAGAGATATTGCAGTTGCTGGATCATCCATTTCTGCCTACTTTGTATACACATTTTGAGACCGACAGATTCTGCTGTTTGGTAATGGAATACTGTCCAGGGGGTGATCTTCACACCTTAAGGCAAAGACAACCTGGGAAACATTTCTTGGAGTATGCTGCACGGTATAAGGCAGAAGAATTTTCTGCATTGAAGGTCTTCTCCAGCTTTTATGCAGCAGAGGTTCTGTTGGCACTTGAATACCTTCACATGCTTGGAGTGGTGTACAGAGACCTTAAACCTGAAAACGTACTGGTCCGAGATGATGGTCACATAATGCTCTCAGACTTCGATCTCTCTCTCAGATGTGCTGTTTCACCTACCCTTATCAGAAATATTGACGGGGATCCCTCCAAACGAGCCGGTGGCGCATTCTGTGTGCAGCCGGCTTGTATGGAGCCTTCATCGGTATGCATCCAGCCTTCATGTTTCATGCCTCGCCTTTTTGCTCAGAAAAATAAGAAGTCAAGGAGGCCTAAAGCGGATCCTGGCCTGCCATCCAGCACACTTCCTGAGCTTGTTGCAGAACCAACAACTGCTCGGTCCATGTCTTTTGTGGGCACTCACGAATACCTTGCTCCCGAAATCATCAAAGGAGAAGGTCATGGAAGTGCAGTGGATTGGTGGACATTTGGGATTTTCTTGCATGAACTATTATATGGTAAAACCCCTTTCAAAGGCTCAGGAAACCGCGCGACCCTTTTCAACGTAGTAGGCCAGCAGCTCAGATTTCCGGAGTCACCGGCGACCAGTTATGCGAGCCGTGATCTCATCCGGTGCCTGCTGGTGAAGGAGCCGCAGCACCGGCTGGGAGTGAAGAGGGGTGCGACTGAGATCAAACAGCACCCGTTCTTTGAAGGCGTGAACTGGGCGTTGATCAGGTGCAGCACTCCACCAGAAGTTCCAAGAGCAGTTGAATGTGATGTTGTAGCAGCAAAGTTTGAAGCAGTTGATACTGTTGGGGTTGGCATGAACAATAGTAGTAAGAAGATGGGAGGTAATAATGAGATGAAGTCTGGGGGTAAATATCTGGACTTTGAGTTCTTTTAG 2334 0.4687 MERVAEPKVLPRSLPVLVEVSNAHTAAMREAGQRLNAQDVSGVRGIPSREGNQFSKSRDGPMTRLASIREVAQLSNARIVLVREDMGFDTRSCQEPPSPVPTRMWKGKSSLPEAVELVPDIQTLKGSNDSLGETGPSSFAGASHPPEPVDTDLMRTVYVPIGQTKSEAACLMKSVSLKGPGPFLEDLSICVPAKKQSMAVVSPAESIGESNETHNIPSPLSGARASQNTENSPPAPDSEEKECVWDASLPPSGNVSPLSSIDSTSVVRTMSIVNSCASTYRSDAVTSDGMLSLDRNCDSTKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSATRCFFAMKVMDKASLASRNKLTRAQTEREILQLLDHPFLPTLYTHFETDRFCCLVMEYCPGGDLHTLRQRQPGKHFLEYAARYKAEEFSALKVFSSFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRNIDGDPSKRAGGAFCVQPACMEPSSVCIQPSCFMPRLFAQKNKKSRRPKADPGLPSSTLPELVAEPTTARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPATSYASRDLIRCLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRAVECDVVAAKFEAVDTVGVGMNNSSKKMGGNNEMKSGGKYLDFEFF 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00773 777 Pfam Protein kinase domain 368 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu6g00773 777 Pfam Protein kinase domain 610 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu6g00773 777 SUPERFAMILY Protein kinase-like (PK-like) 349 731 IPR011009 -
Vimu6g00773 777 MobiDBLite consensus disorder prediction 291 344 - -
Vimu6g00773 777 SMART serkin_6 367 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu6g00773 777 MobiDBLite consensus disorder prediction 202 260 - -
Vimu6g00773 777 ProSiteProfiles Protein kinase domain profile. 367 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu6g00773 777 FunFam Serine/threonine-protein kinase D6PK-like 365 450 - -
Vimu6g00773 777 FunFam serine/threonine-protein kinase D6PK-like 608 731 - -
Vimu6g00773 777 MobiDBLite consensus disorder prediction 292 340 - -
Vimu6g00773 777 Gene3D Transferase(Phosphotransferase) domain 1 608 731 - -
Vimu6g00773 777 ProSitePatterns Serine/Threonine protein kinases active-site signature. 502 514 IPR008271 GO:0004672|GO:0006468
Vimu6g00773 777 Gene3D Phosphorylase Kinase; domain 1 365 450 - -
Vimu6g00773 777 PANTHER FLIPPASE KINASE 1-RELATED 140 736 - -
Vimu6g00773 777 Gene3D Transferase(Phosphotransferase) domain 1 451 532 - -
Vimu6g00773 777 FunFam Serine/threonine-protein kinase OXI1 451 533 - -
Vimu6g00773 777 MobiDBLite consensus disorder prediction 124 149 - -
Vimu6g00773 777 CDD STKc_phototropin_like 365 731 - -
Vimu6g00773 777 MobiDBLite consensus disorder prediction 203 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00773 Vimu-Chr6 8758572 8761584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00773 1 777 AGC Kinase Gene Family AT2G44830 64.875 0.0 920
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Vimu6g00773 Pkinase 5e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00773 - - gmx:100800019 1362.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g01705 9 26177229 26180430 Vimu6g00773 6 8758572 8761584 PCT