Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00750 ATGAAGAATGAAAGAACTCGCGAGTTTCGTTTCTGGTGCGTCAATGGAGAAGACGAAGATATGTGGGTCGCTCTTGGGTTAATTTGCAGGCGATTCACGCGATTGAAGCTGCGCGAGGCCTTTTCGCTGATCCTCTCCACCGATGCTAAACTCCCTAATGCTACATCTCAAGAATTCGCAAGTGCATCAACCTTGCTGACAGACAAACGTCGTGGGTTTAAATTCAATGTACTGCAAGGAACTTCTATGTCTTGCCCTCATGTTGCTGGCATCGCTGGACTTCTAAAAACACGTTATCCTAGTTGGAGTCCTGCTGCTATAAAATCAGCAATCATGACCACAGCAACCACACGAGACAACACAAACAGGCCAATACAGGATGCGTTTGCTAAAACACTGGCAACTCCCTTTGCTTATGGTTCAGGACATGTTCAACCTGACCTTGCCATAGATCCTGGCCTCGTTTACGATCTAGGCCTCACTGATTACTTGAACTTCTTATGCGCTTCCGGATATGACCAACAACTCATTTCTGCCCTCAATTTCAATAGAACTTTCATTTGTTCTGGCACTCACAGTGTAACAGATTTGAACTACCCTTCAATCACATTGCCAAATCTAGGCTTAAAACCCGTAACCATTACTCGCACGGTAACAAATGTTGGAACACCAAGCACATACACTGCAACTGCCCAATTACCTGGATATAACATTACCGTTGTGCCAAATTCCTTGACTTTCAGTAAAATTGGTGAAAAGAAGACATTCAAGGGGACTGTGCAGGCAAGCAGTGTAACTAAGCGGAGAACTTATCAATTTGGAGAATTGCGATGGACAGATGGAAAACATATAGTAAGGAGTCCTATTACAGTAAAGCGCAGATGA 885 0.4407 MKNERTREFRFWCVNGEDEDMWVALGLICRRFTRLKLREAFSLILSTDAKLPNATSQEFASASTLLTDKRRGFKFNVLQGTSMSCPHVAGIAGLLKTRYPSWSPAAIKSAIMTTATTRDNTNRPIQDAFAKTLATPFAYGSGHVQPDLAIDPGLVYDLGLTDYLNFLCASGYDQQLISALNFNRTFICSGTHSVTDLNYPSITLPNLGLKPVTITRTVTNVGTPSTYTATAQLPGYNITVVPNSLTFSKIGEKKTFKGTVQASSVTKRRTYQFGELRWTDGKHIVRSPITVKRR 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00750 294 Gene3D Peptidase S8/S53 domain 67 163 IPR036852 GO:0004252|GO:0006508
Vimu6g00750 294 Pfam Subtilase family 73 120 IPR000209 GO:0006508|GO:0008236
Vimu6g00750 294 ProSitePatterns Serine proteases, subtilase family, serine active site. 80 90 IPR023828 -
Vimu6g00750 294 ProSiteProfiles Serine proteases, subtilase domain profile. 1 150 - -
Vimu6g00750 294 SUPERFAMILY Subtilisin-like 69 156 IPR036852 GO:0004252|GO:0006508
Vimu6g00750 294 Pfam Fibronectin type-III domain 196 291 IPR041469 -
Vimu6g00750 294 Gene3D - 167 293 - -
Vimu6g00750 294 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 69 291 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00750 Vimu-Chr6 8536290 8538802 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00750 68 292 Subtilisin-like Serine Gene Family AT2G04160 58.590 5.78e-80 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00750 - - gmx:100815159 405.601