Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00749 ATGTTATATATTGTATATTTGGGAGCTCATTCTCATGGTGCCAACCCCACTTCCGTTGATCTCCAAATTGCTACCGATTCTCATTATAATTTATTGGCTTCAGTCCTGGGGAGTGAAGAGAAAGCGAAAGAAGCAGTAATTTACTCATACAACAAACACATAAATGGGTTTGCAGCAATGCTGGAAGAGGAAGAAGCAGCAGATATTGGCAAGAAGCCTAACGTGGTGTCAGTGTTCTTGAGCAAAAAGCATAAACTGCACACTACCCGCTCATGGGAGTTTCTTGGACTACACAGAAATGGTAAAAACTCCGCATGGCAAAAGGGAAACTTTGGTGAAAATACAATAATCGCAAACATCGACACAGGTGTTTGGCCAGAGTCAGAGAGCTTCAGTGATGAAGGATATGGTCCCGTTCCCTCCAAATGGCGTGGTGGACTAACAAGTGAATGGTTGTTCGTGCGTATGAACAGAAAGCTGATAGGAGCAAGATTCTTCAACAAAGCTTTCCAGGCATATAACGGCCCACTTGTTGCCCCGCTGCAAACAGCGCGTGACCTCATGGGACATGGGACCCACACTTTATCAACAGCTGGGGGCAATTTCGTCCCACGCGCGCGTGTGTTTGCTGTGGGTAATGGCACCGCAAAGGGTGGGTCCCCGAGAGCACGAGTTGCAGCGTACAAAGTGTGTTGGGATCTGGCGGACCCATCCGGTTGTTACGGCGCGGATATGTTGTCTGCTATCGACCAAGCCATCGACGACGGTGTCGATCTCATAAATCTTTCAATTGGTGGATTTCACGACGTGAGCCCCGAAGGAATACTCACCGATGAGGTTTCCATTGGAGCCTTCCATGCTATTTCTAGAAACATACTTTTAGTTGCTTCTGCTGGAAACGATGGACCAGTACCTGGTTCTGTGGTAAACGTGGCACCTTGGGTCTTCACCATTGCCGCTAGCACCATAGACAGAGACTTTAGCAGTACCATAACCATCAACAACAGTCAACAGATCGAGGGAGCGAGTCTTTTTGTAAATTTGCCACCGAATCAGGCCTTTTCGCTGATCCTCTCCACCGATGCTAAACTCCCTAATGCTACATTTCAGGATGCTCAACTGTGTAGAGCAGGAACACTGGATCCCAGAAAAGTGAATGGGAAAATAGTGTCATGCACTCGCGAAAAGATAAAATCTGTTGCGGAGGGTCAGGAAGCTCTATCTGCAGGTGCAAAGGGAATGCTTGTGAGAAATCAACCAAAGCAGGGAACTACACTTGAAGCTGAGCCCCATGTTTTCTCCGCTGTGACACATTCCCAGCATGGCGACCCACAACCAGATAATATAAGTCCTCCTCCCAATGCTGCTATAGACACTGCACCTACAGAATTTGAAATAGCTTACACGGAACCTTTTAAATCAGGTGCTACCATAAAAATGTCTCCAGCAAGAACATTATTTGGAAGAAAGCCAGCTCCAGTTATGGCTTCATTCTCATCAAGGGGACCCAATAAGATGCAGCCAGCAATTCTCAAGCCAGATGTGACTGCGCCTGGTGTGGACATACTTGCTGCCTACTCAGAATTCGCAAGTGCATCAACCTTGCTAACAGACAAACGTCGTGGATTTAAATTCAACGTAATGCAAGGAACTTCTATGTCTTGCCCTCATGTTACTGGCATTGCTGGACTTATCAAAACACGTTATCCTAAATGGAGCCCTGCTGCTATAAAGTCAGCAATCATGACCACAGCAACCACACTTGACAACACTAAAAGAAAAATACATGACGGGTTTGTGAAAACAGTGGCAGATCCCTTTGCTTATGGTTCAGGACATGTTCAACCTGACCTTGCCATAGATCCTGGCCTCGTTTACGATCTAGGCCTCACTGATTACTTGAACTTCTTATGCGCTTCTGGATATGACCAACAACTCATTTCTGCCCTCAATTTCAATAGAACTTTCATTTGTTCTGGCACTCACAGTGTAACAGATTTGAACTACCCTTCAATCACATTGCCAAATCTAGGCTTAAAACCTGTAACCATTGCTCGCACAGTAACAAATGTTGGGCCACCAAGCACATACACTGCCAGCGTCCAATTGCTTGGATATAACATTAGCGTTGTGCCAAGTTCCTTGACTTTCAGCAAAACTGGTGAAAAGAAGACATTCAAGGTTACTGTGCAGGCAAGCAGTGAAACAAAGCGGAGAACCTATGAATTTGGGGAATTGCGATGGACAGATGGAAAACATATAGTAAGGAGTCCTATTACAGTAAAACGCAGATAA 2295 0.4562 MLYIVYLGAHSHGANPTSVDLQIATDSHYNLLASVLGSEEKAKEAVIYSYNKHINGFAAMLEEEEAADIGKKPNVVSVFLSKKHKLHTTRSWEFLGLHRNGKNSAWQKGNFGENTIIANIDTGVWPESESFSDEGYGPVPSKWRGGLTSEWLFVRMNRKLIGARFFNKAFQAYNGPLVAPLQTARDLMGHGTHTLSTAGGNFVPRARVFAVGNGTAKGGSPRARVAAYKVCWDLADPSGCYGADMLSAIDQAIDDGVDLINLSIGGFHDVSPEGILTDEVSIGAFHAISRNILLVASAGNDGPVPGSVVNVAPWVFTIAASTIDRDFSSTITINNSQQIEGASLFVNLPPNQAFSLILSTDAKLPNATFQDAQLCRAGTLDPRKVNGKIVSCTREKIKSVAEGQEALSAGAKGMLVRNQPKQGTTLEAEPHVFSAVTHSQHGDPQPDNISPPPNAAIDTAPTEFEIAYTEPFKSGATIKMSPARTLFGRKPAPVMASFSSRGPNKMQPAILKPDVTAPGVDILAAYSEFASASTLLTDKRRGFKFNVMQGTSMSCPHVTGIAGLIKTRYPKWSPAAIKSAIMTTATTLDNTKRKIHDGFVKTVADPFAYGSGHVQPDLAIDPGLVYDLGLTDYLNFLCASGYDQQLISALNFNRTFICSGTHSVTDLNYPSITLPNLGLKPVTIARTVTNVGPPSTYTASVQLLGYNISVVPSSLTFSKTGEKKTFKVTVQASSETKRRTYEFGELRWTDGKHIVRSPITVKRR 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00749 764 FunFam Subtilisin-like protease SBT5.3 1 87 - -
Vimu6g00749 764 CDD PA_subtilisin_like 330 436 - -
Vimu6g00749 764 Gene3D - 324 487 - -
Vimu6g00749 764 PRINTS Subtilisin serine protease family (S8) signature 112 131 IPR015500 -
Vimu6g00749 764 PRINTS Subtilisin serine protease family (S8) signature 549 565 IPR015500 -
Vimu6g00749 764 PRINTS Subtilisin serine protease family (S8) signature 186 199 IPR015500 -
Vimu6g00749 764 FunFam Subtilisin-like protease SBT1.5 114 343 - -
Vimu6g00749 764 ProSitePatterns Serine proteases, subtilase family, serine active site. 550 560 IPR023828 -
Vimu6g00749 764 Pfam Subtilase family 112 597 IPR000209 GO:0006508|GO:0008236
Vimu6g00749 764 Gene3D Peptidase S8/S53 domain 115 633 IPR036852 GO:0004252|GO:0006508
Vimu6g00749 764 SUPERFAMILY Subtilisin-like 86 624 IPR036852 GO:0004252|GO:0006508
Vimu6g00749 764 Pfam Fibronectin type-III domain 666 761 IPR041469 -
Vimu6g00749 764 CDD Peptidases_S8_3 84 586 IPR034197 -
Vimu6g00749 764 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 87 IPR037045 -
Vimu6g00749 764 Pfam Peptidase inhibitor I9 3 87 IPR010259 -
Vimu6g00749 764 Gene3D - 637 763 - -
Vimu6g00749 764 ProSiteProfiles Serine proteases, subtilase domain profile. 91 620 - -
Vimu6g00749 764 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 761 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00749 Vimu-Chr6 8519934 8525874 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00749 3 762 Subtilisin-like Serine Gene Family AT2G04160 49.804 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00749 - - gmx:100813564 1152.5