Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu6g00748 | ATGGAATCCATCAAGATTCTAGCCTTATGGAGGATTCTCTCTTACTTTCTTTTGGCCATTCTAACACACTCTTCACTCCAACTTGCTTGGTTTTCCAAAACACTAGTTTTGGCCTCTGCTGCCAGCACAAGAACTCTTGGTGATGAAGCTGCAACTGATAACAGTGAGGCAAATGCACTGTTAAAGTGGAAATACAGCTTTGATAATAGCAGCCAAGATCTCTTATCAACTTGGACAGGTTCTACTTCATGCCAATGGGAAGGAATTCATTGTAACAATTCCAAGTCCATCTCCACCATAGATCTTTCAAATTATGGTCTCATAGGTACCCTTCACACCCTCAACTTCTCAGCTTTTCCTAACCTACTCATCCTAAATATCTTTAACAACTCCTTTTATGGGACTATTCCACCACAAATTGGTAACATGTCCAGAGTAAATGTTTTGAATCTTTCTACAAATTATTTCAATGGTTCCATCCCTCAACAAGTGTGGACACTAAGGAGTTTACAAGGCCTTGATCTGTACAAATGTCAACTAAGTGGTGAGATTCCTAATTCCATAGCAAACCTGTCGAATTTGACATATCTAGATTTAGGCCTAAACAGTTTTTCTGGCCATATTCCACCAGAGATTGGAAAGTTGTACAAGGTAGAGTTTCTAAATCTTAAAATTAATAAATTTTCTGGTTCCATTCCTCAAGAAATTTCAATGTTGAGAAACCTTAAGAATATTGATTTGTCAAGAAATTCTCTCTCTGGTACTATCCCTGAAACAATAGGAAACATGTCTAGTTTAAATTTGCTTCGCATTTCCAATAACTCCCTTTTATCTGGGCCAATTCCATCCTCCTTATGGACCATGTCTAACTTGACCTTGCTCTTTCTTGATAACAATAATCTTTCTGGATCCATCCCTGCTTCCATAGAAAACCTGGCCAATTTAGATACACTTGGACTTGATTACAACCACCTTTCTGGACCTATTCCTTCCACAATTGGAAATCTGACCAAGCTCACCAGGTTGTTTTTACGCTCTAACAATCTTTCTGGATCAATTCCTCCCTCTATAGGAAACTTGATCCATTTGAAAGTACTTAGTCTCCAAATCAACAATCTCACCGGAACAATTCCTGCCACAATTGGAAATTTGAAAAACCTCACTATTTTAGAACTGTCCTTCAACAAACTTAATGGCAGTGTTTCACAAGTCTTGAATAACATTCGGAACATGTCTTTTGTGTTACTTGCTCAGAATGATTTCACAGGCCATTTACCACCACAAATTTGCTCTGCTGGGTCCCTAAGCTCCCTTAGTGCTCACCACAACCGTTTCACCGGTCCGGTGCCAATAAGCTTGAAGAACTGTTCTAGTGTTACTAGACTCAGGTTGGAAGGGAACCAATTGGAAGGAGATATCTCAAAGGATTTTGGTGCATATCCAAATTTGGAATACATTGATTTGAGCGACAACAAGTTTTACGGCCAAATTTCAGCAAACTGGGGGAAGTGTCCTAATCTTGGTACCTTAAAGATATCCAACAATAACATTTCTGGTGTTATACCAGTCGAACTTGCTGAGGCAACCGAACTAGGCAAGCTTCACCTTTCTTCTAATAATTTGAAGGGAAAGATTCCAAAGGAATTAGGGAATATGAAATTGTTAATTGAACTTGAGATTAGCAAAAACCATCTTTCTGGTGACATTCCCAAAGAAATCGGATCACTGCAAATTCTTGAAGATTTGGATCTTGGAGGTAACCAGTTGAGTGGAACAATACCGAGAGAAGTTGTAGAATTGCCCAACTTACGAAGGTTGACTTTGAGCAATAATAAAATAAACGGAACTATTCCCCTGGAGTTTCGCAAATTTCAGCCTCTTGAATATCTTGATCTTAGTGGGAATATGATGACTGGAACAATACCAAAACAGCTTGGAGAGGTGATGAAACTGCAGTGGCTTAATCTCTCTCACAATAATCTTTCTGGAAATATTCCATCCAGTTTTGATGGCCTTTCAGGTTTGATTTCTGTCAACATATCATACAACCAGTTAGAAGGGCCACTTCCAAATAACGAAGCCTTTCTTAATGCTTCAATTGAATCATTGAAAAATAACAGAGACTTGTGTGGCAATGTCACTGGCTTAATGCGTTGCCCAACCAACCACAGTCGGAAGAGGCTCAAGGGCATTCAAATAGCATTATTTATTTTCTTGGGTGCTCTTGTTCTAGTGTTATGTGGGGTGTCAGTTTCAATGTATATTCTATGTCGAAAAGCAAGAAAGGAAGATATACATGGTAAAGAAAATGTGCATTCCGGAAAGAAACTCCCTGGAGAAGTGTTTTCCATATGGAGTCACGATGGAAAAATTATGTTTGAACACATCATTGAAGCAACCGATAATTTCAACGAAAAACATTTGATTGGACTTGGAGGGCAAGGATCGGTTTACAAAGCAGAGATGTCTACAGGCCATGTTTTTGCAGTGAAGAAACTTCACATGGAAACAGATGAAGAGACGCCTAATTTTAAAGCTTTTGAAAACGAAATTCAAGCTTTGACAGAAATCAGGCACCGTAACATTGTAAAGCTATGTGGATTTTGCTCACATTCACGCTTCTCCTTTTTGGTCTACGAGTTCTTGGAAGGGGGTAGCTTGGATCAAGTACTAATCAATGAAAAAAAAGCAGCTTCATTTTACTGGGAACAGAGAGTAAATGTTGTTAAAGGTGTGGCCCATGCTTTATCCTATATGCATCAGGATTGCTCACCACCCATAATTCATCGAGACATATCCAGCAAGAATATTCTTTTAGATTCACAAAAAGAACCTCATGTCTCTGATTTTGGGACAGCTAAGATTCTAAAACCTGGTTCAAGCACTTGGACGACATTTGCAGGCACCTTTGGGTATGCAGCTCCAGAGCTTGCCCAGACCATGGAAGTGACTGAGAAATGTGATGTATTCAGTTTTGGAGTGCTTTGTCTAGAAATCATCATGGGGAAACATCCGGGGGATCTCGTTTCTTCCTTGTTATCTTCATCTTCAGCAGCAATAACTCATAACTTGCTACTAATTGATGTGATAGACCAAAGACCTCCTCATCCTCTTAAATCGGTTGTTGGGGATGTCATTTTGGTTGCGATCTTGGCATTTTCTTGCTTGAATGAAAATCCATGTTCTCGACCAACAATGGATCAAGTGTCTAAAAAGCTTATGATGGGTAAGTCACCTTTAGCAAATGAGTTCCCCAATATCAGACTTGCACAACTCCTCCAAAGCAGTATTTAA | 3294 | 0.3925 | MESIKILALWRILSYFLLAILTHSSLQLAWFSKTLVLASAASTRTLGDEAATDNSEANALLKWKYSFDNSSQDLLSTWTGSTSCQWEGIHCNNSKSISTIDLSNYGLIGTLHTLNFSAFPNLLILNIFNNSFYGTIPPQIGNMSRVNVLNLSTNYFNGSIPQQVWTLRSLQGLDLYKCQLSGEIPNSIANLSNLTYLDLGLNSFSGHIPPEIGKLYKVEFLNLKINKFSGSIPQEISMLRNLKNIDLSRNSLSGTIPETIGNMSSLNLLRISNNSLLSGPIPSSLWTMSNLTLLFLDNNNLSGSIPASIENLANLDTLGLDYNHLSGPIPSTIGNLTKLTRLFLRSNNLSGSIPPSIGNLIHLKVLSLQINNLTGTIPATIGNLKNLTILELSFNKLNGSVSQVLNNIRNMSFVLLAQNDFTGHLPPQICSAGSLSSLSAHHNRFTGPVPISLKNCSSVTRLRLEGNQLEGDISKDFGAYPNLEYIDLSDNKFYGQISANWGKCPNLGTLKISNNNISGVIPVELAEATELGKLHLSSNNLKGKIPKELGNMKLLIELEISKNHLSGDIPKEIGSLQILEDLDLGGNQLSGTIPREVVELPNLRRLTLSNNKINGTIPLEFRKFQPLEYLDLSGNMMTGTIPKQLGEVMKLQWLNLSHNNLSGNIPSSFDGLSGLISVNISYNQLEGPLPNNEAFLNASIESLKNNRDLCGNVTGLMRCPTNHSRKRLKGIQIALFIFLGALVLVLCGVSVSMYILCRKARKEDIHGKENVHSGKKLPGEVFSIWSHDGKIMFEHIIEATDNFNEKHLIGLGGQGSVYKAEMSTGHVFAVKKLHMETDEETPNFKAFENEIQALTEIRHRNIVKLCGFCSHSRFSFLVYEFLEGGSLDQVLINEKKAASFYWEQRVNVVKGVAHALSYMHQDCSPPIIHRDISSKNILLDSQKEPHVSDFGTAKILKPGSSTWTTFAGTFGYAAPELAQTMEVTEKCDVFSFGVLCLEIIMGKHPGDLVSSLLSSSSAAITHNLLLIDVIDQRPPHPLKSVVGDVILVAILAFSCLNENPCSRPTMDQVSKKLMMGKSPLANEFPNIRLAQLLQSSI | 1097 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu6g00748 | 1097 | Gene3D | Ribonuclease Inhibitor | 207 | 305 | IPR032675 | - | |
Vimu6g00748 | 1097 | FunFam | Leucine-rich repeat receptor protein kinase EMS1 | 306 | 404 | - | - | |
Vimu6g00748 | 1097 | PANTHER | LEUCINE RICH REPEAT KINASE 2 | 332 | 1077 | - | - | |
Vimu6g00748 | 1097 | FunFam | MDIS1-interacting receptor like kinase 2 | 882 | 1079 | - | - | |
Vimu6g00748 | 1097 | ProSiteProfiles | Leucine-rich repeat profile. | 650 | 672 | IPR001611 | GO:0005515 | |
Vimu6g00748 | 1097 | ProSiteProfiles | Protein kinase domain profile. | 803 | 1075 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu6g00748 | 1097 | Pfam | Leucine rich repeat | 601 | 661 | IPR001611 | GO:0005515 | |
Vimu6g00748 | 1097 | Gene3D | Phosphorylase Kinase; domain 1 | 768 | 881 | - | - | |
Vimu6g00748 | 1097 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 209 | 305 | - | - | |
Vimu6g00748 | 1097 | SUPERFAMILY | Protein kinase-like (PK-like) | 788 | 1073 | IPR011009 | - | |
Vimu6g00748 | 1097 | SUPERFAMILY | RNI-like | 100 | 407 | - | - | |
Vimu6g00748 | 1097 | SUPERFAMILY | L domain-like | 442 | 711 | - | - | |
Vimu6g00748 | 1097 | SMART | LRR_typ_2 | 336 | 360 | IPR003591 | - | |
Vimu6g00748 | 1097 | SMART | LRR_typ_2 | 288 | 312 | IPR003591 | - | |
Vimu6g00748 | 1097 | SMART | LRR_typ_2 | 648 | 671 | IPR003591 | - | |
Vimu6g00748 | 1097 | SMART | LRR_typ_2 | 239 | 263 | IPR003591 | - | |
Vimu6g00748 | 1097 | SMART | LRR_typ_2 | 600 | 623 | IPR003591 | - | |
Vimu6g00748 | 1097 | SMART | LRR_typ_2 | 384 | 407 | IPR003591 | - | |
Vimu6g00748 | 1097 | SMART | LRR_typ_2 | 191 | 215 | IPR003591 | - | |
Vimu6g00748 | 1097 | FunFam | Leucine-rich repeat receptor protein kinase MSP1 | 766 | 881 | - | - | |
Vimu6g00748 | 1097 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 927 | 939 | IPR008266 | GO:0004672|GO:0006468 | |
Vimu6g00748 | 1097 | ProSiteProfiles | Leucine-rich repeat profile. | 602 | 623 | IPR001611 | GO:0005515 | |
Vimu6g00748 | 1097 | FunFam | MDIS1-interacting receptor like kinase 2 isoform A | 53 | 208 | - | - | |
Vimu6g00748 | 1097 | Gene3D | Ribonuclease Inhibitor | 416 | 728 | IPR032675 | - | |
Vimu6g00748 | 1097 | Gene3D | Transferase(Phosphotransferase) domain 1 | 882 | 1083 | - | - | |
Vimu6g00748 | 1097 | Pfam | Leucine rich repeat N-terminal domain | 54 | 92 | IPR013210 | - | |
Vimu6g00748 | 1097 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 | 408 | 723 | - | - | |
Vimu6g00748 | 1097 | SMART | LRR_sd22_2 | 288 | 314 | - | - | |
Vimu6g00748 | 1097 | SMART | LRR_sd22_2 | 336 | 362 | - | - | |
Vimu6g00748 | 1097 | SMART | LRR_sd22_2 | 384 | 410 | - | - | |
Vimu6g00748 | 1097 | SMART | LRR_sd22_2 | 239 | 265 | - | - | |
Vimu6g00748 | 1097 | SMART | LRR_sd22_2 | 576 | 599 | - | - | |
Vimu6g00748 | 1097 | SMART | LRR_sd22_2 | 600 | 629 | - | - | |
Vimu6g00748 | 1097 | Pfam | Protein kinase domain | 803 | 1071 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu6g00748 | 1097 | Gene3D | Ribonuclease Inhibitor | 52 | 206 | IPR032675 | - | |
Vimu6g00748 | 1097 | Gene3D | Ribonuclease Inhibitor | 306 | 414 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu6g00748 | Vimu-Chr6 | 8508331 | 8511872 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu6g00748 | 56 | 975 | Receptor kinase-like Gene Family | AT4G08850 | 44.313 | 0.0 | 716 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Vimu6g00748 | Pkinase | 5.3e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu6g00748 | - | - | vra:106759489 | 2089.69 |