Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00747 ATGGGTTTGCAGCAATGCTGGAAGAGGAAGAAGCAGCAGATATTGGCAGCAGAAAACCCTAACGTGGTGTCAGTGTTCTTGAGCAAAAAACATGAACTGCATACTACCCGCTCATGGGAATTTCTTGGACTACAACGAAATGGTAAGAACTCTGCATGGCAGAAGGGAAGCTTTGGTGAAAATACAATAATTGCAAACATCGACACTGGTGTTTGGCCAGAGTCACAGAGCTTCAGTGATAAAGGATATGGTCCTGTTCCCTCCAAATGGCGTGGGGGTAATGTTTGTCAGATTAACAAACTTCCACGCTCTAAGGCAAATCTATGCAACAGAAAGCTGATAGGAGCAAGATTCTTCAACAAAGCTTTCCAGGCTTACAATGGCGAACTTGTTCCATCGCTGCAAACAGCGCGTGATTTCATGGGACACGGGACCCACACTCTATCAACCGCTGGGGGCAATTTCGTCCGAGGTGCAAGCGTATTTGCGGTGGGCAACGGCACCGCAAAGGGTGGGTCCCCTAGAGCACGAGTTGCAGCGTACAAAGTGTGTTGGTCTCTGACGGACCCTGCCGGTTGTTACGGCGCCGACGTGTTGGCTGCTATCGACCAAGCCATCGATGACGGCGTTGATGTCATCAATCTTTCAGTTGGTGGCAGTTACGTGGTGACCCCCGAAGGAATATTCACCGACGAAGTTTCCATCGGAGCCTTCCATGCCATTTCTAGAAATATAGTGGTAGTTGCCTCTGCCGGAAATAATGGACCAACACCTGGCTCTGTGGTCAATGTGGCTCCTTGGGTCTTCACCATCGCTGCTAGCACCATAGACAGAGATTTCAGCAGCAATTTAACCATTAACAACAATCAGCAAATTGAGGGAGCGAGTCTTTTTGTAAACTTGCCACCGAACCAGGCCTTTTCTCTGATCCTTTCCACTGATGCTAAACTTCCTAATGCAACATTTCGAGACGCTCAACTGTGTAGACGTGGAACACTTGATCCTGCAAAAGTAAAGGGCAAAATAGTGCGTTGTATTCGAGATGGAAAGATAAAATCAGTCGCTGAGGGTAATGAAGCTCTTTCTTCAGGCGCACAGGGAATGATTTTGGGCAATCAAAAGCAAAATGGAAAAACAACTTTTGGCGAGCCTCATGTTCTCTCCACTGTGGGCACAAACGATGACCATGCAGGAGCACAGTCTGATTTTTTCTTAACTGCAACGGACCCTATAGAATCAGGTGCTACCATAAGAATGTCCCCAGCAAGGACGTTATTTGGAAGAAAGCCAGCTCCAGTTATGGCTTCATTCTCATCTCGAGGACCCAATAAGATTCAACCATCAATACTTAAGCCCGATGTGACTGCACCCGGTGTGAACATACTTGCTGCCTACTCAGAATTCGCAAGTGCATCAACCTTGCTGACAGACAAACGTCGTGGGTTTAAATTCAATGTACTGCAAGGAACTTCTATGTCTTGCCCTCATGTTGCTGGCATCGCTGGACTTCTAAAAACACGTTATCCTAGTTGGAGTCCTGCTGCTATAAAATCAGCAATCATGACCACAGACAACACAAACAGGCCAATACAGGATGCGTTTGCTAAAACACTGGCAACTCCCTTTGCTTATGGTTCAGGACATGTTCAACCTGACCTTGCCATAGATCCTGGCCTCGTTTACGATCTAGGCCTCACTGATTACTTGAACTTCTTATGCGCTTCCGGATATGACCAACAACTCATTTCTGCCCTCAATTTCAATAGAACTTTCATTTGTTCTGGCACTCACAGAGTGACAGATTTGAACTACCCTTCAATCACATTGCCAAATCTAGGCTTAAAACCCGTAACCATTACTCGCACGGTAACAAATGTTGGAACACCAAGCACATACACTGCAACTGCCCAATTACCTGGATATAACATTACCGTTGTGCCAAATTCCTTGACTTTCAGTAAAATTGGTGAAAAGAAGACATTCAAGGTGACTGTGCAGGCAAGCCGTGTAACTAAGCGGAGAACTTATCAATTTGGAGAATTGCGATGGACAGATGGAAAACATATATGTTACATTGTATACTTGGGAACTCACTCTCATGGTTCCAACCCTACTTCTGTTGACCTCCAAATTGCTACGTATTCTCATTATGATTTACTAGCTTCAATCCTGGGAAGTGAGGAGAAAGCGAAAGAAGCAGTTCTTTACTCATACAATAGACACATAAATGGGTTTGCAGCAATGCTGGAAGAGGAAGAAGCAGCAGATATTGGCATGTTCTTGAGCAACAAACATAAACTGCACACTACCCGTTCATGGGAATTTCTTGGACTACACATAAATGGTAAGAACTCTGCATGGCAAGAGGGAATCTTTGGTGAAAATACAATAATTGCAAACATCGACACAGGTGTTTGGCCAGAGTCAGAGAGCTTCGGTGATGAAGGATATGGTCCTGTTCCCTCCAAATGGCGTGGGGGTAATGTTTGTCAAATTAGCAAACTTCCACGATCCAAGACAAATCCATGCAACAGAAAGCTGATAGGAGCAAGATTCTTCAACAAAGCTTTTGAGGTCTACAATGGTGAACTTGTTCCCTCAATGCAAACAGCGCGTGACTTCATGGGGCATGGTACCCACACTCTATCAACCGCTGGAGGCAATTTCGTGGGAGGCGCAAGCGTATTTGCGGTGGGTAATGGCACCGCAAAGGGTGGGTCCCCGAGAGCACGAGTTGCGGCGTACAAAGTGTGTTGGTCTCTGACAGACCCAGCCGGTTGTTACGGCGCCGACGTATTGGCTGCTATCGACCAAGCCATCGACGACGGCGTCGACGTCATCAATCTTTCAGCTGGTGGCAGTTACGTCGCCAGTCCCGAAGGAATATTCACTGACGAAGTCTCCATTGGAGCCTTTCATGCTATTTCAAGAAACATACTTTTAGTTGCTTCTGCAGGGAACGATGGACCAACTCCTGGTTCTGTGGTGAATGTGGCTCCTTGGGTCTTCACCATTGCTGCTAGCACCATAGACAGATATTTCAGCAGTAATTTAATCATTAACGACAATGAAGTAATCGAGGGAGCGAGTCTTTTTGTAAACTTGCCACCGAACCAGGACTTTTCTTTGATCCTTTCCACTGATGCTAAGCTTCCCAATGCAACATTTCGAGACGCTGAACTGTGTAAGCGTGGAACACTTGATCCTGAAAAAGTAAAGGGAAAAATAGTGCGTTGTATTCGAGGTGGAAAGATAAAATCAGTTGGTGAGGGTAATGAAGCTCTTTCTTCAGGCGCACAGGGAATGATTTTGCGCAATCAAAAGCGAAATGGGAAAACAACTTTTGGCGAGCCTCATGTTCTCTCCACTGTGGGCACAAATGATGACCATGCAGGAGCACAACCTGATTTTTACTTAACTGCAACGGACACTATAAAATCAGATACTACCATAAGAATGACCCCAGCAAGGACGTTATTTGGAAGAAAGCCAGCTCCAATTATGGCTTCATTCTCATCTAGAGGACCCAATAAGATTCAGCCATCAATACTCAAGCCTGATGTGACTGCACCTGGTGTGAACATACTTTCTGCTTTCTCAGAATTCGCAAGTGCATCAAACTTGCCAACAGACAATCGTCGTGGGTTTAAATTCAACGTAATGCAAGGTACTTCTATGTCTTGCCCTCATGTTGCTGGCATCGCTGGACTTATCAAAACACGTCATCCTAGTTGGAGTCCTGCTGCTATAAAATCAGCAATCATGACCACAGCAACCACACTTGACAACACAAACAGGCCAATACAGGATGCATTTGCTAAAACATTGGCAACTCCATTTGCTTATGGTTCAGGACATGTTAAACCTGACCTTGCCATAGATCCTGGCCTTGTTTACGATCTAGGCCTCACTGATTACTTGAACTTCTTATGCGCTTCTGGATACGACCAACAACTCATTTCTTCTCTCAATTTCAAAACAACTTTCATTTGTTCAGGCACTCACAGTGTCACAGATTTGAACTACCCTTCAATCACATTGCCAAATCTAGGCTTAAAACCTGTAACCGTTACTCGCACAGTAACAAATGTTGGAACATCAAGCACATACGCTGCAACTACTCAATTACCTGGATATAACATTACCGTTGTGCCAAATTCCTTGACTTTCAATAAAATTGGTGAAAAGAAGACATTCAAGGTGACTGTGCAGGCAAGCAGTGTAACTAAGAGGAGAACTTATCAATTTGGAGAATTGCGATGGACAGATGGAAAACATATAGCAAGTCCGCCTCACATGCCAACTTTCTTCTCAAATGTGGTTGAAATGGAGATGCTTGAATAG 4344 0.45 MGLQQCWKRKKQQILAAENPNVVSVFLSKKHELHTTRSWEFLGLQRNGKNSAWQKGSFGENTIIANIDTGVWPESQSFSDKGYGPVPSKWRGGNVCQINKLPRSKANLCNRKLIGARFFNKAFQAYNGELVPSLQTARDFMGHGTHTLSTAGGNFVRGASVFAVGNGTAKGGSPRARVAAYKVCWSLTDPAGCYGADVLAAIDQAIDDGVDVINLSVGGSYVVTPEGIFTDEVSIGAFHAISRNIVVVASAGNNGPTPGSVVNVAPWVFTIAASTIDRDFSSNLTINNNQQIEGASLFVNLPPNQAFSLILSTDAKLPNATFRDAQLCRRGTLDPAKVKGKIVRCIRDGKIKSVAEGNEALSSGAQGMILGNQKQNGKTTFGEPHVLSTVGTNDDHAGAQSDFFLTATDPIESGATIRMSPARTLFGRKPAPVMASFSSRGPNKIQPSILKPDVTAPGVNILAAYSEFASASTLLTDKRRGFKFNVLQGTSMSCPHVAGIAGLLKTRYPSWSPAAIKSAIMTTDNTNRPIQDAFAKTLATPFAYGSGHVQPDLAIDPGLVYDLGLTDYLNFLCASGYDQQLISALNFNRTFICSGTHRVTDLNYPSITLPNLGLKPVTITRTVTNVGTPSTYTATAQLPGYNITVVPNSLTFSKIGEKKTFKVTVQASRVTKRRTYQFGELRWTDGKHICYIVYLGTHSHGSNPTSVDLQIATYSHYDLLASILGSEEKAKEAVLYSYNRHINGFAAMLEEEEAADIGMFLSNKHKLHTTRSWEFLGLHINGKNSAWQEGIFGENTIIANIDTGVWPESESFGDEGYGPVPSKWRGGNVCQISKLPRSKTNPCNRKLIGARFFNKAFEVYNGELVPSMQTARDFMGHGTHTLSTAGGNFVGGASVFAVGNGTAKGGSPRARVAAYKVCWSLTDPAGCYGADVLAAIDQAIDDGVDVINLSAGGSYVASPEGIFTDEVSIGAFHAISRNILLVASAGNDGPTPGSVVNVAPWVFTIAASTIDRYFSSNLIINDNEVIEGASLFVNLPPNQDFSLILSTDAKLPNATFRDAELCKRGTLDPEKVKGKIVRCIRGGKIKSVGEGNEALSSGAQGMILRNQKRNGKTTFGEPHVLSTVGTNDDHAGAQPDFYLTATDTIKSDTTIRMTPARTLFGRKPAPIMASFSSRGPNKIQPSILKPDVTAPGVNILSAFSEFASASNLPTDNRRGFKFNVMQGTSMSCPHVAGIAGLIKTRHPSWSPAAIKSAIMTTATTLDNTNRPIQDAFAKTLATPFAYGSGHVKPDLAIDPGLVYDLGLTDYLNFLCASGYDQQLISSLNFKTTFICSGTHSVTDLNYPSITLPNLGLKPVTVTRTVTNVGTSSTYAATTQLPGYNITVVPNSLTFNKIGEKKTFKVTVQASSVTKRRTYQFGELRWTDGKHIASPPHMPTFFSNVVEMEMLE 1447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00747 1447 CDD Peptidases_S8_3 765 1259 IPR034197 -
Vimu6g00747 1447 ProSiteProfiles Serine proteases, subtilase domain profile. 772 1293 - -
Vimu6g00747 1447 CDD PA_subtilisin_like 283 390 - -
Vimu6g00747 1447 SUPERFAMILY Subtilisin-like 33 559 IPR036852 GO:0004252|GO:0006508
Vimu6g00747 1447 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 692 1429 IPR045051 -
Vimu6g00747 1447 ProSitePatterns Serine proteases, subtilase family, serine active site. 489 499 IPR023828 -
Vimu6g00747 1447 ProSiteProfiles Serine proteases, subtilase domain profile. 38 555 - -
Vimu6g00747 1447 SUPERFAMILY Subtilisin-like 767 1297 IPR036852 GO:0004252|GO:0006508
Vimu6g00747 1447 Gene3D - 1310 1435 - -
Vimu6g00747 1447 Gene3D - 572 694 - -
Vimu6g00747 1447 Gene3D - 1011 1160 - -
Vimu6g00747 1447 Gene3D - 277 426 - -
Vimu6g00747 1447 Pfam Fibronectin type-III domain 601 689 IPR041469 -
Vimu6g00747 1447 Pfam Fibronectin type-III domain 1339 1428 IPR041469 -
Vimu6g00747 1447 CDD PA_subtilisin_like 1017 1124 - -
Vimu6g00747 1447 FunFam Subtilisin-like protease SBT1.5 795 1020 - -
Vimu6g00747 1447 Gene3D Peptidase S8/S53 domain 62 568 IPR036852 GO:0004252|GO:0006508
Vimu6g00747 1447 CDD Peptidases_S8_3 31 523 IPR034197 -
Vimu6g00747 1447 Gene3D Peptidase S8/S53 domain 796 1306 IPR036852 GO:0004252|GO:0006508
Vimu6g00747 1447 PRINTS Subtilisin serine protease family (S8) signature 873 886 IPR015500 -
Vimu6g00747 1447 PRINTS Subtilisin serine protease family (S8) signature 1222 1238 IPR015500 -
Vimu6g00747 1447 PRINTS Subtilisin serine protease family (S8) signature 793 812 IPR015500 -
Vimu6g00747 1447 Pfam Subtilase family 793 1264 IPR000209 GO:0006508|GO:0008236
Vimu6g00747 1447 Pfam Subtilase family 59 527 IPR000209 GO:0006508|GO:0008236
Vimu6g00747 1447 FunFam Subtilisin-like protease SBT1.5 61 289 - -
Vimu6g00747 1447 ProSitePatterns Serine proteases, subtilase family, serine active site. 1223 1233 IPR023828 -
Vimu6g00747 1447 Pfam Peptidase inhibitor I9 691 757 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00747 Vimu-Chr6 8486510 8497077 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00747 17 688 Subtilisin-like Serine Gene Family AT2G04160 52.639 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00747 - - csv:101212014 1312.36